Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yceG [C]
Identifier: 182682106
GI number: 182682106
Start: 1754933
End: 1756027
Strand: Reverse
Name: yceG [C]
Synonym: XfasM23_1584
Alternate gene names: 182682106
Gene position: 1756027-1754933 (Counterclockwise)
Preceding gene: 182682107
Following gene: 182682105
Centisome position: 69.25
GC content: 53.79
Gene sequence:
>1095_bases GTGGGACGCAAACGCGGATGTCTAGTCGTGCTGGTGGCACCGATGATGTTGGTGTTGATCGTTTTACTGGGACTCATTGC ACGGCCTGATTTAAAGCATTATGTGCCAGGCTGGAAGTATTACGAGCATTATCAGCATTTTGCGCATACCCCGCTCAGTG CGAGCGCGTCTAGTGTGGAGATTGCACGTGGTGATTCTCTGCATACGGTCTTGCTTAAATTACGTAAGGCTGGGGTTCAA AGCGGTAGTGACTTGGAGTGGCAACTATTGGCATATCAGGTAGGTGCTGCCGGTAATTTGAAGTTCGGCGATTACGCATT GGCGCCTGCGGTTTCTCCACATGATTTGCTACAGCGTATGCGTCATGGCAAGGGTGAGCATTACCGCTTCACTATCGTTG AGGGTTGGAACATTCGTCAGCTGCGTGCTGCGTTGCGCCAAGCTACTCCTTTGGTGCATCGTGCAGGCATGCTGGATGAT GCGACATTAATGGCTCAATTGGGTTTCCCGGGTGAACATCCGGAAGGGCGTTTTTTGCCTGAGACCTATTTGTACCAACG TGGAGACAGCGACTTGGACGTTTTGCGTCGTGCCCATGCAGCGATGCAAAAGGCGCTTGCCGAGACGTGGGCGGCGCGTG ATCCGGCACTGAAGTTGCATACTCCTGATGAGGCGCTGATTCTTGCTTCGATTGTGGAGAAAGAAAGTGGCTTGTCTACC GAGCGGCCGAAGATTGCTGGAGTGTTTCTGCACCGCATTGCGCGAGGGATGCGATTACAGGCAGATTCGACGGTGATCTA TGGGCTGGGCAGCATCTACGACGGTAATATCCGCAAGCGTGATTTAAAGACCCCCACCCCCTATAACACTTACGTCCACA CCGGATTGACGCCGACTCCAATTTCAATGCCTGGCCAGGATGCATTGCGTGCTGTGACGCGTCCTGCAGTGGGCGACGCG CTGTATTTTGTTGCCCTTGGCGATGGGAGTGGCGGACATACGTTTTCCTCATCACTGCAGCAGCATAACGCGGCGGTGGC GCGTTACTTGCAACGCCTTCGTGAACGCGAAAGCAAAACGAAGGAGCGGCAATGA
Upstream 100 bases:
>100_bases GCGTACTGCGCGCCCTGCATGTCATCTGAACGTTAGTTTTCGGTGATGCTGATACGCGCGTTATGCTGTCTGGCCTTGAA GGCTTGACGAGGTGGACTTG
Downstream 100 bases:
>100_bases ATGGTGTTGATTGCCTAGGAAATTCATGGATGATGTCGGCACTTACCCCTTGGCAGCAGCGTGCTTACGATCAGATGGTG GCGGCGTTGGATGCTGGCCA
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGRKRGCLVVLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHTVLLKLRKAGVQ SGSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDD ATLMAQLGFPGEHPEGRFLPETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLST ERPKIAGVFLHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDALRAVTRPAVGDA LYFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ
Sequences:
>Translated_364_residues MGRKRGCLVVLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHTVLLKLRKAGVQ SGSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDD ATLMAQLGFPGEHPEGRFLPETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLST ERPKIAGVFLHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDALRAVTRPAVGDA LYFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ >Mature_363_residues GRKRGCLVVLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVEIARGDSLHTVLLKLRKAGVQS GSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRMRHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDDA TLMAQLGFPGEHPEGRFLPETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLSTE RPKIAGVFLHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTPISMPGQDALRAVTRPAVGDAL YFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKTKERQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=263, Percent_Identity=39.1634980988593, Blast_Score=197, Evalue=1e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 40323; Mature: 40192
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRKRGCLVVLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEE IARGDSLHTVLLKLRKAGVQSGSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRM EECCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCHHHHHHHH RHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGFPGEHPEGRFLP HCCCCCEEEEEEEECCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC ETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLST HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCC ERPKIAGVFLHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTP CCCHHHHHHHHHHHHCCEECCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEECCCCCCC ISMPGQDALRAVTRPAVGDALYFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKT CCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KERQ HCCC >Mature Secondary Structure GRKRGCLVVLVAPMMLVLIVLLGLIARPDLKHYVPGWKYYEHYQHFAHTPLSASASSVE CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEE IARGDSLHTVLLKLRKAGVQSGSDLEWQLLAYQVGAAGNLKFGDYALAPAVSPHDLLQRM EECCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCEECCCCCCHHHHHHHH RHGKGEHYRFTIVEGWNIRQLRAALRQATPLVHRAGMLDDATLMAQLGFPGEHPEGRFLP HCCCCCEEEEEEEECCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCC ETYLYQRGDSDLDVLRRAHAAMQKALAETWAARDPALKLHTPDEALILASIVEKESGLST HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCC ERPKIAGVFLHRIARGMRLQADSTVIYGLGSIYDGNIRKRDLKTPTPYNTYVHTGLTPTP CCCHHHHHHHHHHHHCCEECCCCEEEEECCCEECCCCCCCCCCCCCCCCCEEECCCCCCC ISMPGQDALRAVTRPAVGDALYFVALGDGSGGHTFSSSLQQHNAAVARYLQRLRERESKT CCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KERQ HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]