Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is suhB [H]

Identifier: 182682101

GI number: 182682101

Start: 1751436

End: 1752263

Strand: Direct

Name: suhB [H]

Synonym: XfasM23_1579

Alternate gene names: 182682101

Gene position: 1751436-1752263 (Clockwise)

Preceding gene: 182682099

Following gene: 182682102

Centisome position: 69.07

GC content: 55.07

Gene sequence:

>828_bases
ATGCAGAAACCCGCGGTTAACATCATGGTCAAAGCCGCTCGTTCCGCCGGCAACGTCCTATTGCGACACATCAATAAATT
AGAAACGCTGCATGTCATCCAAAAAAGCCGTATGGACTATGCCAGCGACGTGGATGAGATGGCTGAAAAGGTCATTGTCA
AGGAACTCAAGCGGGCCTATCCGGACTACGGCATCCTCGGCGAGGAAGGGGGACTGCAGGGCAATCATCGAATCATGTGG
GTGATTGATCCACTGGACGGCACCAGTAACTATTTGCGTGGTTTCCCGCATTACTGCGTTTCAATCGCGTTGGTCGAAAA
TGGTGAACCTACAGATGCCGTGATTTTCGATCCGCTGCGCAACGAGCTGTTCACTGCCAGCCGTGGTGCTGGTGCAGTCC
TCAATGAACGCAAGATCCGCGTGGCGAACCGTAAAGATTTGAACGGTACGATGCTAAACACGGGTTTCTCACCACGGGAA
CGCAGCCGTGCTCATGCGCAGTTGAAATGCGTGGATGCGTTGCTGATGCAGGCCGAAGATATCCGCCGTAGCGGTTCGGC
CGCTCTGGACTTGGCCTACGTTGCTTGTGGCCGTGCAGATGCTTACTTCGAGGCTGGAATAAAGGTGTGGGATGTGGCTG
CGGGAATGTTGTTAGTCCGCGAAGCCGGGGGTTACGTGTGCGACTTCAAGGGTGCTGATGCGCCCCGCATGGATGATAAA
GGGCCGGAGAGCTGCCAGTTGATCGCAGGCAATATCAAAGTGGCCCACGCGCTGCAACAAGTCATTGTCAGCAGTGGTTA
CGGGCGGGAGTTCGATCCGAAGCGCTGA

Upstream 100 bases:

>100_bases
GTGTAGTGCTGCATGGTAAACTGCCCGACGGGCGACGCACTGGATTGTTCCTCCCCCTACTCAACCATCCACTCTTCTCA
CGTGACGAGAGTCTCCAGGC

Downstream 100 bases:

>100_bases
GTCGGTATGGTTCTCTTGGAACGTTTGTAAGGTTGGGATGAAAGATCGTATCGGTGACACAGTCCCTGTTGCGGGGGCAA
CGTCCTACTGCAAGCTACAG

Product: inositol-phosphate phosphatase

Products: NA

Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEEGGLQGNHRIMW
VIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRE
RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK
GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR

Sequences:

>Translated_275_residues
MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEEGGLQGNHRIMW
VIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRE
RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK
GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR
>Mature_275_residues
MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAYPDYGILGEEGGLQGNHRIMW
VIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLRNELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRE
RSRAHAQLKCVDALLMQAEDIRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK
GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR

Specific function: Unknown

COG id: COG0483

COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the inositol monophosphatase family [H]

Homologues:

Organism=Homo sapiens, GI5031789, Length=229, Percent_Identity=34.061135371179, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI221625487, Length=229, Percent_Identity=34.061135371179, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI7657236, Length=269, Percent_Identity=30.4832713754647, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI221625507, Length=141, Percent_Identity=31.9148936170213, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI1788882, Length=257, Percent_Identity=44.7470817120623, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1790659, Length=228, Percent_Identity=27.6315789473684, Blast_Score=75, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI193202570, Length=246, Percent_Identity=28.4552845528455, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI193202572, Length=244, Percent_Identity=28.2786885245902, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320493, Length=202, Percent_Identity=36.1386138613861, Blast_Score=134, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6321836, Length=204, Percent_Identity=32.3529411764706, Blast_Score=117, Evalue=2e-27,
Organism=Drosophila melanogaster, GI21357329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=144, Evalue=7e-35,
Organism=Drosophila melanogaster, GI24664926, Length=272, Percent_Identity=31.9852941176471, Blast_Score=136, Evalue=2e-32,
Organism=Drosophila melanogaster, GI21357303, Length=232, Percent_Identity=31.8965517241379, Blast_Score=133, Evalue=1e-31,
Organism=Drosophila melanogaster, GI24664922, Length=242, Percent_Identity=31.8181818181818, Blast_Score=127, Evalue=8e-30,
Organism=Drosophila melanogaster, GI21357957, Length=228, Percent_Identity=30.7017543859649, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24664918, Length=192, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020583
- InterPro:   IPR000760
- InterPro:   IPR020550
- InterPro:   IPR022337 [H]

Pfam domain/function: PF00459 Inositol_P [H]

EC number: =3.1.3.25 [H]

Molecular weight: Translated: 30206; Mature: 30206

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC
PDYGILGEEGGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLR
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCEEEEEEEECCCCCCEEEECHHH
NELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRERSRAHAQLKCVDALLMQAED
HHHHHCCCCCCCEECCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
IRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK
HHHCCCHHEEHHHHHCCCCHHHHHCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCCCC
GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR
CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQKPAVNIMVKAARSAGNVLLRHINKLETLHVIQKSRMDYASDVDEMAEKVIVKELKRAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHC
PDYGILGEEGGLQGNHRIMWVIDPLDGTSNYLRGFPHYCVSIALVENGEPTDAVIFDPLR
CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCEEEEEEEECCCCCCEEEECHHH
NELFTASRGAGAVLNERKIRVANRKDLNGTMLNTGFSPRERSRAHAQLKCVDALLMQAED
HHHHHCCCCCCCEECCCEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
IRRSGSAALDLAYVACGRADAYFEAGIKVWDVAAGMLLVREAGGYVCDFKGADAPRMDDK
HHHCCCHHEEHHHHHCCCCHHHHHCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCCCC
GPESCQLIAGNIKVAHALQQVIVSSGYGREFDPKR
CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]