Click here to switch to the map view.

The map label for this gene is 182682090

Identifier: 182682090

GI number: 182682090

Start: 1740125

End: 1740784

Strand: Direct

Name: 182682090

Synonym: XfasM23_1568

Alternate gene names: NA

Gene position: 1740125-1740784 (Clockwise)

Preceding gene: 182682089

Following gene: 182682091

Centisome position: 68.63

GC content: 58.33

Gene sequence:

>660_bases
GTGAAACCCACGTTTTGGTTCCTGACGCTATTATTCACCCTGGCAACATTAAGCCTGGTGCTAAAACCACTGTGGCCCCA
AGCACGCGGCACCCTGGCAATGTCATTACTCCTGCTGAGTCTTGCTGCCGCCGCACTGTATACCTTGGTCGGCACCCCAC
AGGCATTACAACCGGCCCAGATCGCCGCACCGCAGACCCTTGATGCAGCCATTGCACAACTGCGTGACACCTTGCATCAG
CATCCAGAACGGATAGAAGGCTGGATGCTACTGGGACACGCACTGCGCCAACAACAGCGTTTTGGCGAAGCACAGAAGGC
CTTTACAGAAGCCGCGCGACGCGCCCCAAACAATCCCGATATTTTGATGGCTACTGCAGAAATACGGATGCACATGGCAC
CAAACCAACGCCTTGACGCCGAAGCAATCGGCCTCCTCAAACACGTCTTGATCTTGCAACCCCGGCACCAACGCGCCCGC
TGGTTTCTCGGCATGGCATACCGCCAAGCCGGCGATGCCGCCGCCGCAGTAGCAACCTGGGAACCGCTGCTGAGCGTCGT
CGACACCGCAACCGCCCGCAGCCTAGGCGAACAGATCGCCCTAGCACAGCACGATGCCCACGTAGCAGCACAGCCACATC
AATCGCACCCACATCAATAA

Upstream 100 bases:

>100_bases
TCGGTCCACTGCTCTTACTACTCATCGGCGTGACCGTGGTTACAGGGGTGATCCGGCGCTACCGCGCACCCCCACCGCCC
TCAGACAACCGCACCACCAG

Downstream 100 bases:

>100_bases
CTGGGCGCACGTTCCACCAACCGCACCGACACTGGGCCGCAACCGGACACTCCCCAGCTTGGACACCAACACATTGCCTT
ACACCAATCGCCGTGACCGG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat Protein; TPR Repeat-Containing Protein; Truncated C-Type Cytochrome Biogenesis Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKPTFWFLTLLFTLATLSLVLKPLWPQARGTLAMSLLLLSLAAAALYTLVGTPQALQPAQIAAPQTLDAAIAQLRDTLHQ
HPERIEGWMLLGHALRQQQRFGEAQKAFTEAARRAPNNPDILMATAEIRMHMAPNQRLDAEAIGLLKHVLILQPRHQRAR
WFLGMAYRQAGDAAAAVATWEPLLSVVDTATARSLGEQIALAQHDAHVAAQPHQSHPHQ

Sequences:

>Translated_219_residues
MKPTFWFLTLLFTLATLSLVLKPLWPQARGTLAMSLLLLSLAAAALYTLVGTPQALQPAQIAAPQTLDAAIAQLRDTLHQ
HPERIEGWMLLGHALRQQQRFGEAQKAFTEAARRAPNNPDILMATAEIRMHMAPNQRLDAEAIGLLKHVLILQPRHQRAR
WFLGMAYRQAGDAAAAVATWEPLLSVVDTATARSLGEQIALAQHDAHVAAQPHQSHPHQ
>Mature_219_residues
MKPTFWFLTLLFTLATLSLVLKPLWPQARGTLAMSLLLLSLAAAALYTLVGTPQALQPAQIAAPQTLDAAIAQLRDTLHQ
HPERIEGWMLLGHALRQQQRFGEAQKAFTEAARRAPNNPDILMATAEIRMHMAPNQRLDAEAIGLLKHVLILQPRHQRAR
WFLGMAYRQAGDAAAAVATWEPLLSVVDTATARSLGEQIALAQHDAHVAAQPHQSHPHQ

Specific function: Unknown

COG id: COG4235

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24129; Mature: 24129

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTFWFLTLLFTLATLSLVLKPLWPQARGTLAMSLLLLSLAAAALYTLVGTPQALQPAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
IAAPQTLDAAIAQLRDTLHQHPERIEGWMLLGHALRQQQRFGEAQKAFTEAARRAPNNPD
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ILMATAEIRMHMAPNQRLDAEAIGLLKHVLILQPRHQRARWFLGMAYRQAGDAAAAVATW
EEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
EPLLSVVDTATARSLGEQIALAQHDAHVAAQPHQSHPHQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC
>Mature Secondary Structure
MKPTFWFLTLLFTLATLSLVLKPLWPQARGTLAMSLLLLSLAAAALYTLVGTPQALQPAQ
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
IAAPQTLDAAIAQLRDTLHQHPERIEGWMLLGHALRQQQRFGEAQKAFTEAARRAPNNPD
HCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ILMATAEIRMHMAPNQRLDAEAIGLLKHVLILQPRHQRARWFLGMAYRQAGDAAAAVATW
EEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
EPLLSVVDTATARSLGEQIALAQHDAHVAAQPHQSHPHQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA