| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is hslO [H]
Identifier: 182681690
GI number: 182681690
Start: 1294360
End: 1295220
Strand: Direct
Name: hslO [H]
Synonym: XfasM23_1148
Alternate gene names: 182681690
Gene position: 1294360-1295220 (Clockwise)
Preceding gene: 182681687
Following gene: 182681691
Centisome position: 51.05
GC content: 48.78
Gene sequence:
>861_bases ATGACCGATCACGACTCCCTGACGCGCTTTCTGTTACCTCATGCCGTAGTGCGCGGTATCCATGTCAGTCTTAACGAAAC TTGGAGCAATATCCAGGAAAAAAACCACTATCCTGCATTTGTAAGCAGGCTACTTGGTGAAGCTGTAGTAGCGGCGGCGC TATTTGCCAATCACACCAAGGTAAATGGACGCCTCTCAGTGGCATTACACAGCAAAACAGCGTTACGCACATTGTTTGCC GAATGCACGACATCCGGCACCTTGCGCGGCACTGTCCATATGGCCGAGGACATTTCTCACTCCGAAGCACCAACCAGTTT ACGCGAATTAGATCACAATGCCCTGCTGGCAATCACTGTCGAAAGTTCAGGACTCAATCCAGATGAGCTACAGCGTCACC AAAGCCTCATCGCACTGGATGCAGCCAACTTGACTGAAGCATTCGAAATTTATTGCCGCGATTCTGAACAGACGCCAATC AGGATCTTACTGGGAGCCGAAGGAAAGCGGGCGGCGGGGCTATTATTGCAAAAATTGCCTAGTCATACTGACGATGTGGA TGGCTGGCCACGCATTTGCGACCTATTCGACACCCTGCAAGCATCTGAACTGCTCGAACTCTCCGGACAAGTTCTGTTAC ATCGTTTGTTTCACAAAGAAAATCCACAACAACTAGAAAAACGTCAGCTCCGCTTTGGCTGCTCCTGTTCACGCGAAAAA GTCGCCGCAATGTTGCAAGGACTTGGTGAAAACGAAGCCCGCGCCGCTCTCGAAGCTAACGGCAGAATCAAAGTAAAATG CGAATTTTGCGGACAAAAATACCACTTTTCTTACAAAGAAATTGACGCATTATTTCCTTAA
Upstream 100 bases:
>100_bases TCTTTGAATCCACTGATACATCCCCATGCTTCCCCATCATCCATTGAACACTTAAATCTGCTCTTTCTATCTCCAAGCAG GCGTTCTCGACAATCAACTC
Downstream 100 bases:
>100_bases CAGAAGAGGAAAATTCGATGGAACTTAAAATATAACAACATGATGATTATCACTATCTGAAAGAATTTCATCTTGTTAAA TAATCATAAGACACCTAATA
Product: Hsp33 protein
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTDHDSLTRFLLPHAVVRGIHVSLNETWSNIQEKNHYPAFVSRLLGEAVVAAALFANHTKVNGRLSVALHSKTALRTLFA ECTTSGTLRGTVHMAEDISHSEAPTSLRELDHNALLAITVESSGLNPDELQRHQSLIALDAANLTEAFEIYCRDSEQTPI RILLGAEGKRAAGLLLQKLPSHTDDVDGWPRICDLFDTLQASELLELSGQVLLHRLFHKENPQQLEKRQLRFGCSCSREK VAAMLQGLGENEARAALEANGRIKVKCEFCGQKYHFSYKEIDALFP
Sequences:
>Translated_286_residues MTDHDSLTRFLLPHAVVRGIHVSLNETWSNIQEKNHYPAFVSRLLGEAVVAAALFANHTKVNGRLSVALHSKTALRTLFA ECTTSGTLRGTVHMAEDISHSEAPTSLRELDHNALLAITVESSGLNPDELQRHQSLIALDAANLTEAFEIYCRDSEQTPI RILLGAEGKRAAGLLLQKLPSHTDDVDGWPRICDLFDTLQASELLELSGQVLLHRLFHKENPQQLEKRQLRFGCSCSREK VAAMLQGLGENEARAALEANGRIKVKCEFCGQKYHFSYKEIDALFP >Mature_285_residues TDHDSLTRFLLPHAVVRGIHVSLNETWSNIQEKNHYPAFVSRLLGEAVVAAALFANHTKVNGRLSVALHSKTALRTLFAE CTTSGTLRGTVHMAEDISHSEAPTSLRELDHNALLAITVESSGLNPDELQRHQSLIALDAANLTEAFEIYCRDSEQTPIR ILLGAEGKRAAGLLLQKLPSHTDDVDGWPRICDLFDTLQASELLELSGQVLLHRLFHKENPQQLEKRQLRFGCSCSREKV AAMLQGLGENEARAALEANGRIKVKCEFCGQKYHFSYKEIDALFP
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family [H]
Homologues:
Organism=Escherichia coli, GI87082260, Length=285, Percent_Identity=30.5263157894737, Blast_Score=144, Evalue=5e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - InterPro: IPR023212 [H]
Pfam domain/function: PF01430 HSP33 [H]
EC number: NA
Molecular weight: Translated: 31786; Mature: 31654
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHDSLTRFLLPHAVVRGIHVSLNETWSNIQEKNHYPAFVSRLLGEAVVAAALFANHTK CCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC VNGRLSVALHSKTALRTLFAECTTSGTLRGTVHMAEDISHSEAPTSLRELDHNALLAITV CCCEEEEEEECHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCHHHHHCCCCEEEEEEE ESSGLNPDELQRHQSLIALDAANLTEAFEIYCRDSEQTPIRILLGAEGKRAAGLLLQKLP ECCCCCHHHHHHHHHHHEECHHHHHHHHHEEECCCCCCCEEEEEECCCCHHHHHHHHHCC SHTDDVDGWPRICDLFDTLQASELLELSGQVLLHRLFHKENPQQLEKRQLRFGCSCSREK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH VAAMLQGLGENEARAALEANGRIKVKCEFCGQKYHFSYKEIDALFP HHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHCCC >Mature Secondary Structure TDHDSLTRFLLPHAVVRGIHVSLNETWSNIQEKNHYPAFVSRLLGEAVVAAALFANHTK CCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC VNGRLSVALHSKTALRTLFAECTTSGTLRGTVHMAEDISHSEAPTSLRELDHNALLAITV CCCEEEEEEECHHHHHHHHHHHCCCCCEEEEEEHHHHCCCCCCCHHHHHCCCCEEEEEEE ESSGLNPDELQRHQSLIALDAANLTEAFEIYCRDSEQTPIRILLGAEGKRAAGLLLQKLP ECCCCCHHHHHHHHHHHEECHHHHHHHHHEEECCCCCCCEEEEEECCCCHHHHHHHHHCC SHTDDVDGWPRICDLFDTLQASELLELSGQVLLHRLFHKENPQQLEKRQLRFGCSCSREK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH VAAMLQGLGENEARAALEANGRIKVKCEFCGQKYHFSYKEIDALFP HHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA