| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681691
Identifier: 182681691
GI number: 182681691
Start: 1295329
End: 1296243
Strand: Direct
Name: 182681691
Synonym: XfasM23_1149
Alternate gene names: NA
Gene position: 1295329-1296243 (Clockwise)
Preceding gene: 182681690
Following gene: 182681705
Centisome position: 51.08
GC content: 49.84
Gene sequence:
>915_bases ATGTTTTTGGGGAACTTGGCCCATGTTTACCAGGTCTCACTCTCAATGAAAAACTTGACTCACCTACTCCTTGCACTGAT AGCCGCCCTAGCGGCTATTCTTCCTGCGAGTGCGCAGTCAACGGTCCCCTCTCACTCTACTAACAGCGCAGTACTGCCAA TCTGGAATAAAGGCAGTGGCAAAGTCGAAGCCCTACTTTACCTAGAACCTGCTGGCGAACAGAAAGTGGGTACACGCTGG AACTTCAACAAAAATTCGTTAGACATGGCCTTTGGTTTATCTCCCACTAGTTCATTGGGACTGCTATGTAACAATGGCAC TGGAATCAACATGGTCGGTTTGAGTATGCATTGCCTGCTTGCCAGCTTGGACGAAATTAATGCAGATAATGTCAACCGCC AGATCGCAGCGACTGCATTGTTTAATCACAAATCGACTCGGTTCGGATTCACCGCTAGTAGAGCGCGCAATATCCTGCCA GCATGGTTATTTGGAAATACTCCTTTTAACTTGACCAAAGTCGAACAGAACAACTTAACTGTGTTTGGCCAGAAAAGTGC AGGCAGAGAAGGCTTTGTCTCCATAGGTGGCACCTATGCTCGTGCCCGTGTAGTTCCGTTGACAAATGCCACTCCCGATC TTGCTGGGCAGTGGGACAGTAAAACCCTCAGCATCGGTGGTGGTTACGGATCGTTCAGTGCCCACATCGTTGGCCGTGTC GTCGACGCTCCTGGCCGCAGTCCCGAAAAATTGAAAGGTATTGGTTTTGGCCTAACTTGGCGCACCCCTTGGAGCGGCCA TTTCTCAGTCGGGGCAGAAAATATCATCAGCCGCGGCAGTAATCCTTTTGCACCTAGCGATGAGAGTAGCAAGGACGGCA CAGTACCTTACGTACGCTACGAACAAGATCTCTAG
Upstream 100 bases:
>100_bases GAAAATTCGATGGAACTTAAAATATAACAACATGATGATTATCACTATCTGAAAGAATTTCATCTTGTTAAATAATCATA AGACACCTAATATCAGATCA
Downstream 100 bases:
>100_bases TAAAGATTCAATAAGGGAATAACATAAAATAAAATTGACTTAAATAATCTGTGTTATATAACTCCTTTCCATCAGAAATA ATTTCACCTCCCTAATAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MFLGNLAHVYQVSLSMKNLTHLLLALIAALAAILPASAQSTVPSHSTNSAVLPIWNKGSGKVEALLYLEPAGEQKVGTRW NFNKNSLDMAFGLSPTSSLGLLCNNGTGINMVGLSMHCLLASLDEINADNVNRQIAATALFNHKSTRFGFTASRARNILP AWLFGNTPFNLTKVEQNNLTVFGQKSAGREGFVSIGGTYARARVVPLTNATPDLAGQWDSKTLSIGGGYGSFSAHIVGRV VDAPGRSPEKLKGIGFGLTWRTPWSGHFSVGAENIISRGSNPFAPSDESSKDGTVPYVRYEQDL
Sequences:
>Translated_304_residues MFLGNLAHVYQVSLSMKNLTHLLLALIAALAAILPASAQSTVPSHSTNSAVLPIWNKGSGKVEALLYLEPAGEQKVGTRW NFNKNSLDMAFGLSPTSSLGLLCNNGTGINMVGLSMHCLLASLDEINADNVNRQIAATALFNHKSTRFGFTASRARNILP AWLFGNTPFNLTKVEQNNLTVFGQKSAGREGFVSIGGTYARARVVPLTNATPDLAGQWDSKTLSIGGGYGSFSAHIVGRV VDAPGRSPEKLKGIGFGLTWRTPWSGHFSVGAENIISRGSNPFAPSDESSKDGTVPYVRYEQDL >Mature_304_residues MFLGNLAHVYQVSLSMKNLTHLLLALIAALAAILPASAQSTVPSHSTNSAVLPIWNKGSGKVEALLYLEPAGEQKVGTRW NFNKNSLDMAFGLSPTSSLGLLCNNGTGINMVGLSMHCLLASLDEINADNVNRQIAATALFNHKSTRFGFTASRARNILP AWLFGNTPFNLTKVEQNNLTVFGQKSAGREGFVSIGGTYARARVVPLTNATPDLAGQWDSKTLSIGGGYGSFSAHIVGRV VDAPGRSPEKLKGIGFGLTWRTPWSGHFSVGAENIISRGSNPFAPSDESSKDGTVPYVRYEQDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32450; Mature: 32450
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00879 ODR_DC_2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLGNLAHVYQVSLSMKNLTHLLLALIAALAAILPASAQSTVPSHSTNSAVLPIWNKGSG CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC KVEALLYLEPAGEQKVGTRWNFNKNSLDMAFGLSPTSSLGLLCNNGTGINMVGLSMHCLL CEEEEEEECCCCCCCCCCEECCCCCCEEEEECCCCCCCEEEEEECCCCEEEEHHHHHHHH ASLDEINADNVNRQIAATALFNHKSTRFGFTASRARNILPAWLFGNTPFNLTKVEQNNLT HHHHHCCCCCCCCEEEEEEEECCCCCCCCEEHHHHCCCCEEEEECCCCCEEEEEECCCEE VFGQKSAGREGFVSIGGTYARARVVPLTNATPDLAGQWDSKTLSIGGGYGSFSAHIVGRV EEECCCCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHEEEEEE VDAPGRSPEKLKGIGFGLTWRTPWSGHFSVGAENIISRGSNPFAPSDESSKDGTVPYVRY ECCCCCCHHHHHEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEE EQDL CCCC >Mature Secondary Structure MFLGNLAHVYQVSLSMKNLTHLLLALIAALAAILPASAQSTVPSHSTNSAVLPIWNKGSG CCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCC KVEALLYLEPAGEQKVGTRWNFNKNSLDMAFGLSPTSSLGLLCNNGTGINMVGLSMHCLL CEEEEEEECCCCCCCCCCEECCCCCCEEEEECCCCCCCEEEEEECCCCEEEEHHHHHHHH ASLDEINADNVNRQIAATALFNHKSTRFGFTASRARNILPAWLFGNTPFNLTKVEQNNLT HHHHHCCCCCCCCEEEEEEEECCCCCCCCEEHHHHCCCCEEEEECCCCCEEEEEECCCEE VFGQKSAGREGFVSIGGTYARARVVPLTNATPDLAGQWDSKTLSIGGGYGSFSAHIVGRV EEECCCCCCCCEEEECCEEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHEEEEEE VDAPGRSPEKLKGIGFGLTWRTPWSGHFSVGAENIISRGSNPFAPSDESSKDGTVPYVRY ECCCCCCHHHHHEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEE EQDL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA