| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182681505
Identifier: 182681505
GI number: 182681505
Start: 1125000
End: 1127150
Strand: Direct
Name: 182681505
Synonym: XfasM23_0959
Alternate gene names: NA
Gene position: 1125000-1127150 (Clockwise)
Preceding gene: 182681502
Following gene: 182681506
Centisome position: 44.37
GC content: 47.98
Gene sequence:
>2151_bases ATGCGTTTTAACCTGTTGTCGCTTTTCGTTTTAGCTACATTGATAGCTATCGACTCCACTCATGCGGGCGAGGGCATGTG GGTTCCACAACAGCTTCCGGAAATTGCTGGCCCTCTAAAGCAGGCTGGCCTACAACTGTCACCAGAACAATTGTCCAATT TGACAGGTGACCCCATGGGGGCAGTGGTCTCTCTCGGCAATTGCACCGCGAGTCTGGTTTCACCAGAAGGACTTGTGATC ACTAACCATCATTGCGCTTATGGTGCGATTCAGTTGAACTCCACGCCTAAAAAGAACTTAATCAAAGAAGGGTTCAATGC GTTGACTCAGGCTGATGAAGTCAGTGCCGGTCCGAATGCGCGTATTTACGTGCTTGAGCAGATTACCGATGTCACCGCTC AAGCTAAAGCTGCTCTGGCTGCTGCCGGTAATGACCCCTTCAAGCGTACGACGGCATTGGAGACATTCAGCAAACAAGAA ATCGCCAAATGCGAGGAAGAGCAGGGTTATCGCTGCCAATTCTTCAGTTTCGCTGGTGGAAATACCTACAGAGTGTTCAA GAACCTGGAGATCAAAGACGTGCGTTTGGTTTACGCACCGCAGGGGAGTGTGGGTAAGTTCGGGGGCGACGTCGATAACT GGATGTGGCCGCGTCATACCGGTGACTTTTCTTTCTACCGTGCCTACGTCGGTAAAGACGGTAAACCAGCGAGCTTCTCT AAAGAGAACATACGCTACCGTCCCAAACACTGGCTGAAATTTAGCGATCAACCATTAGGTGATGGTGACTTCGTGATGGT CGCTGGTTACCCAGGACGTACCAATCGTTATGCTTTGGTGGCCGAATTTGAGAATACTGCTCAGTGGACTTATCCGGTGA TTGGCCAGCATTTCAAGAATCTCATTGCTTTGATCGAGGCGGCTGGCAAACAGAATCCAGAAATTCAAGTGAAATATGCG AGCACTTTAGCTGGATTGAATAACACATCGAAAAACTTTGATGGTCAATTGGATGGCTTCCGACGCATTAATGCTATAGG TCAGAAACAGAGTGAAGAAACAGCAGTATTAGCTTGGTTGAAACAGCAGGGCATACGTGGACACGAAGCATTGGCTGCGC ATCAAACATTGGTTGATCTGACAGAACAATACAAAGCAAATCAGGATCGTGATTTTGTATTGGGTCAGTTCAACGGAAGT GGTGTCATTGGTGTAGCGGTGAACCTATATCGCTTGGCAATCGAGCGCACAAAATCTGATGCCCAACGTGAAGCGGGATA TCAGGAGCGCGATCTGCCAACCATTGAAGGCAACTTAAAGCAGATGGAGCGACGTTACTTACCGGAAATGGATCGCCAGA TGCAGCAATACTGGCTCACCGAATACAACAAGCTTCCTGTCAAACAGCGTGTGGCTGCAATTGATGTTTGGTTGGGAGAT GGCATCCCAGCAACCCTCAAGCGCTTGGATGACACCAAATTAAGCAGTTCTGAGGAAAGGCTGAAGTGGTTTAATGCCGA CCGTGCAGCCTTCGAAAGCAGTCAAGATCCAGCGATCCGTTATGCGGTGGCCATCATGCCAGCATTACTGGAGATTGAAC GTCAGAATAAAATCCGTACTGGAGAACTACTTAAAGCGCGTCCGATCTACTTGCAAGCCTTAGCTGACTACAACAAGAGT CATGGCAAATTTGTTTACCCAGACGCCAACTCATCATTACGTATTACCTTCGGCCACGTGAAAGGCTATTCACCCAAAGA TGGCGTCCAGTACACACCGTTTACGACACTGCAGGGTGTCATGGCAAAGAATACAGGTGTCGAGCCGTTCGATTCACCGA AGTCACTGATTGATGCGATAAAGGCAAAGAGCTACGCTAATTTAGCTGATCAGCGTATTGGCACTGTCCCTGTGAATTTT CTATCTGACTTGGACATTACTGGCGGCAACTCCGGATCGCCAGTCTTAGATGCCCACGGAAAATTGGTGGGTTTAGCATT TGACGGTAATTGGGAGTCTGTCAGTAGTAATTGGGTATTTGATCCTGTGATGACTCGAACAATTGCAGTTGATAGTCGTT ATGTACAGTGGATCATGACTGAAGTTGCACCAGCACCACGCCTACTAAAGGAATTGAATTTGTATCGTTAA
Upstream 100 bases:
>100_bases TTCAGCCAACAGCCCACTTTTTCATATCTTCGCAGTCAATGGACTTCCGCTCAGAGTTACACTATTGCAATACCTACTGT GTGCCATGGAGTGATTACTG
Downstream 100 bases:
>100_bases ACTGCTGCAAAATACAGCAGATATTCTTTCAGCCGCCGTCATTGCGGTGATGGCGGCTTTCCCATCATTAAGAGACTTTT TATAGCATGCGTATTTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MRFNLLSLFVLATLIAIDSTHAGEGMWVPQQLPEIAGPLKQAGLQLSPEQLSNLTGDPMGAVVSLGNCTASLVSPEGLVI TNHHCAYGAIQLNSTPKKNLIKEGFNALTQADEVSAGPNARIYVLEQITDVTAQAKAALAAAGNDPFKRTTALETFSKQE IAKCEEEQGYRCQFFSFAGGNTYRVFKNLEIKDVRLVYAPQGSVGKFGGDVDNWMWPRHTGDFSFYRAYVGKDGKPASFS KENIRYRPKHWLKFSDQPLGDGDFVMVAGYPGRTNRYALVAEFENTAQWTYPVIGQHFKNLIALIEAAGKQNPEIQVKYA STLAGLNNTSKNFDGQLDGFRRINAIGQKQSEETAVLAWLKQQGIRGHEALAAHQTLVDLTEQYKANQDRDFVLGQFNGS GVIGVAVNLYRLAIERTKSDAQREAGYQERDLPTIEGNLKQMERRYLPEMDRQMQQYWLTEYNKLPVKQRVAAIDVWLGD GIPATLKRLDDTKLSSSEERLKWFNADRAAFESSQDPAIRYAVAIMPALLEIERQNKIRTGELLKARPIYLQALADYNKS HGKFVYPDANSSLRITFGHVKGYSPKDGVQYTPFTTLQGVMAKNTGVEPFDSPKSLIDAIKAKSYANLADQRIGTVPVNF LSDLDITGGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPVMTRTIAVDSRYVQWIMTEVAPAPRLLKELNLYR
Sequences:
>Translated_716_residues MRFNLLSLFVLATLIAIDSTHAGEGMWVPQQLPEIAGPLKQAGLQLSPEQLSNLTGDPMGAVVSLGNCTASLVSPEGLVI TNHHCAYGAIQLNSTPKKNLIKEGFNALTQADEVSAGPNARIYVLEQITDVTAQAKAALAAAGNDPFKRTTALETFSKQE IAKCEEEQGYRCQFFSFAGGNTYRVFKNLEIKDVRLVYAPQGSVGKFGGDVDNWMWPRHTGDFSFYRAYVGKDGKPASFS KENIRYRPKHWLKFSDQPLGDGDFVMVAGYPGRTNRYALVAEFENTAQWTYPVIGQHFKNLIALIEAAGKQNPEIQVKYA STLAGLNNTSKNFDGQLDGFRRINAIGQKQSEETAVLAWLKQQGIRGHEALAAHQTLVDLTEQYKANQDRDFVLGQFNGS GVIGVAVNLYRLAIERTKSDAQREAGYQERDLPTIEGNLKQMERRYLPEMDRQMQQYWLTEYNKLPVKQRVAAIDVWLGD GIPATLKRLDDTKLSSSEERLKWFNADRAAFESSQDPAIRYAVAIMPALLEIERQNKIRTGELLKARPIYLQALADYNKS HGKFVYPDANSSLRITFGHVKGYSPKDGVQYTPFTTLQGVMAKNTGVEPFDSPKSLIDAIKAKSYANLADQRIGTVPVNF LSDLDITGGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPVMTRTIAVDSRYVQWIMTEVAPAPRLLKELNLYR >Mature_716_residues MRFNLLSLFVLATLIAIDSTHAGEGMWVPQQLPEIAGPLKQAGLQLSPEQLSNLTGDPMGAVVSLGNCTASLVSPEGLVI TNHHCAYGAIQLNSTPKKNLIKEGFNALTQADEVSAGPNARIYVLEQITDVTAQAKAALAAAGNDPFKRTTALETFSKQE IAKCEEEQGYRCQFFSFAGGNTYRVFKNLEIKDVRLVYAPQGSVGKFGGDVDNWMWPRHTGDFSFYRAYVGKDGKPASFS KENIRYRPKHWLKFSDQPLGDGDFVMVAGYPGRTNRYALVAEFENTAQWTYPVIGQHFKNLIALIEAAGKQNPEIQVKYA STLAGLNNTSKNFDGQLDGFRRINAIGQKQSEETAVLAWLKQQGIRGHEALAAHQTLVDLTEQYKANQDRDFVLGQFNGS GVIGVAVNLYRLAIERTKSDAQREAGYQERDLPTIEGNLKQMERRYLPEMDRQMQQYWLTEYNKLPVKQRVAAIDVWLGD GIPATLKRLDDTKLSSSEERLKWFNADRAAFESSQDPAIRYAVAIMPALLEIERQNKIRTGELLKARPIYLQALADYNKS HGKFVYPDANSSLRITFGHVKGYSPKDGVQYTPFTTLQGVMAKNTGVEPFDSPKSLIDAIKAKSYANLADQRIGTVPVNF LSDLDITGGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPVMTRTIAVDSRYVQWIMTEVAPAPRLLKELNLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79532; Mature: 79532
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFNLLSLFVLATLIAIDSTHAGEGMWVPQQLPEIAGPLKQAGLQLSPEQLSNLTGDPMG CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCHHHHHCCCCCCCH AVVSLGNCTASLVSPEGLVITNHHCAYGAIQLNSTPKKNLIKEGFNALTQADEVSAGPNA HEEECCCCEEEEECCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC RIYVLEQITDVTAQAKAALAAAGNDPFKRTTALETFSKQEIAKCEEEQGYRCQFFSFAGG EEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC NTYRVFKNLEIKDVRLVYAPQGSVGKFGGDVDNWMWPRHTGDFSFYRAYVGKDGKPASFS CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC KENIRYRPKHWLKFSDQPLGDGDFVMVAGYPGRTNRYALVAEFENTAQWTYPVIGQHFKN CCCCCCCCHHHCEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEHHHHHHHHHH LIALIEAAGKQNPEIQVKYASTLAGLNNTSKNFDGQLDGFRRINAIGQKQSEETAVLAWL HHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH KQQGIRGHEALAAHQTLVDLTEQYKANQDRDFVLGQFNGSGVIGVAVNLYRLAIERTKSD HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHH AQREAGYQERDLPTIEGNLKQMERRYLPEMDRQMQQYWLTEYNKLPVKQRVAAIDVWLGD HHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEEECC GIPATLKRLDDTKLSSSEERLKWFNADRAAFESSQDPAIRYAVAIMPALLEIERQNKIRT CCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GELLKARPIYLQALADYNKSHGKFVYPDANSSLRITFGHVKGYSPKDGVQYTPFTTLQGV CCHHCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEECCHHHHHHH MAKNTGVEPFDSPKSLIDAIKAKSYANLADQRIGTVPVNFLSDLDITGGNSGSPVLDAHG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEECCC KLVGLAFDGNWESVSSNWVFDPVMTRTIAVDSRYVQWIMTEVAPAPRLLKELNLYR CEEEEEECCCCCCCCCCEEECHHHHHEEEECHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure MRFNLLSLFVLATLIAIDSTHAGEGMWVPQQLPEIAGPLKQAGLQLSPEQLSNLTGDPMG CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCHHHHHCCCCCCCH AVVSLGNCTASLVSPEGLVITNHHCAYGAIQLNSTPKKNLIKEGFNALTQADEVSAGPNA HEEECCCCEEEEECCCCEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC RIYVLEQITDVTAQAKAALAAAGNDPFKRTTALETFSKQEIAKCEEEQGYRCQFFSFAGG EEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC NTYRVFKNLEIKDVRLVYAPQGSVGKFGGDVDNWMWPRHTGDFSFYRAYVGKDGKPASFS CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC KENIRYRPKHWLKFSDQPLGDGDFVMVAGYPGRTNRYALVAEFENTAQWTYPVIGQHFKN CCCCCCCCHHHCEECCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEHHHHHHHHHH LIALIEAAGKQNPEIQVKYASTLAGLNNTSKNFDGQLDGFRRINAIGQKQSEETAVLAWL HHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH KQQGIRGHEALAAHQTLVDLTEQYKANQDRDFVLGQFNGSGVIGVAVNLYRLAIERTKSD HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHH AQREAGYQERDLPTIEGNLKQMERRYLPEMDRQMQQYWLTEYNKLPVKQRVAAIDVWLGD HHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHEEEEEEECC GIPATLKRLDDTKLSSSEERLKWFNADRAAFESSQDPAIRYAVAIMPALLEIERQNKIRT CCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC GELLKARPIYLQALADYNKSHGKFVYPDANSSLRITFGHVKGYSPKDGVQYTPFTTLQGV CCHHCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEECCHHHHHHH MAKNTGVEPFDSPKSLIDAIKAKSYANLADQRIGTVPVNFLSDLDITGGNSGSPVLDAHG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEECCC KLVGLAFDGNWESVSSNWVFDPVMTRTIAVDSRYVQWIMTEVAPAPRLLKELNLYR CEEEEEECCCCCCCCCCEEECHHHHHEEEECHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA