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The map label for this gene is yicC [H]

Identifier: 182681310

GI number: 182681310

Start: 894016

End: 894918

Strand: Reverse

Name: yicC [H]

Synonym: XfasM23_0757

Alternate gene names: 182681310

Gene position: 894918-894016 (Counterclockwise)

Preceding gene: 182681316

Following gene: 182681309

Centisome position: 35.29

GC content: 54.37

Gene sequence:

>903_bases
ATGGGCGCGCTAGGGTACCATCCATATTTTGAGAGCAATATGATCCATAGCATGACTGCGTTCGCCGCAGATGAGCACCT
TACACCATGGGGCCTGTTGGCCTGCGAGCTGCGTTCAGTCAACCACCGCTTCCTGGATATCGTCATACGCCTTCCTGAAG
AACTCCGTGCTCTGGAATCACAACTACGTGAGCGCGTGGCCGCACGGGTCAGCCGCGGCAAGCTCGATTTGACGGTACGC
CTATCACCACAGGAGATCCACACTGGGAAGCTGGTAGTGAACGAACTGCTGTTATCCCATCTCAGCACCCTGGCACTACG
CCTATCAGCACAGTTCCCCGCGTTACGTGTCACATTTGCAGAGCTGCTACAGATCCCTGGTGTCCTGAAGGGTGAGCAGA
TCGACATGACCACGTTACAAGGACACGCCGTGGCGCTGCTAGATAAGGTACTGGATAACTTCATTGCCACGCGGGAACGC
GAAGGTCTCAAAATGCAAGCAATGATCGCGCAACGTGCTAGTGCCATTGAACGCATCGTCGGTGAGGTTCGCACCCTGAT
TCCCACCATCCGCGAAGGCCAACACAACAAACTAAACGCTCGCATGAATCACCTGTCGTATCCCGTCGATCACGGTCGCA
TTGAGCAAGAGTTGGTGCTATGGCTACAAAAGCTAGACGTGGATGAGGAGTTGGATCGACTCAGCAGTCACATCAGCGAA
CTACATCGCATCCTCCAGCAACGCGAACCCGTCGGGCGGCGCCTGGATTTTCTAATGCAAGAATTCAACCGCGAAGCCAA
CACACTCGGCTCAAAATCGGTGGACAGCCGCACTTCTAATGCCACGATTGAGCTGAAGGTACTGATCGACCAGATCCGCG
AGCAAGTGCAGAACATCGAATAA

Upstream 100 bases:

>100_bases
CAACGCATCGGCTTGACGACCACTGGGACGTGAAACATTCATATTGGTTTTTTCTTATTAGTCATAGTGAATGAAAAATT
GAACCACCTTAAGGCCCCGC

Downstream 100 bases:

>100_bases
CCGTAATAGTGCCTTTAACGGCAGTGACATCGCACACCAAGTATCCACCTGATCCATTGTCCACTGAGCAATCTCTATTC
TATGCGCGGCACCCTCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MGALGYHPYFESNMIHSMTAFAADEHLTPWGLLACELRSVNHRFLDIVIRLPEELRALESQLRERVAARVSRGKLDLTVR
LSPQEIHTGKLVVNELLLSHLSTLALRLSAQFPALRVTFAELLQIPGVLKGEQIDMTTLQGHAVALLDKVLDNFIATRER
EGLKMQAMIAQRASAIERIVGEVRTLIPTIREGQHNKLNARMNHLSYPVDHGRIEQELVLWLQKLDVDEELDRLSSHISE
LHRILQQREPVGRRLDFLMQEFNREANTLGSKSVDSRTSNATIELKVLIDQIREQVQNIE

Sequences:

>Translated_300_residues
MGALGYHPYFESNMIHSMTAFAADEHLTPWGLLACELRSVNHRFLDIVIRLPEELRALESQLRERVAARVSRGKLDLTVR
LSPQEIHTGKLVVNELLLSHLSTLALRLSAQFPALRVTFAELLQIPGVLKGEQIDMTTLQGHAVALLDKVLDNFIATRER
EGLKMQAMIAQRASAIERIVGEVRTLIPTIREGQHNKLNARMNHLSYPVDHGRIEQELVLWLQKLDVDEELDRLSSHISE
LHRILQQREPVGRRLDFLMQEFNREANTLGSKSVDSRTSNATIELKVLIDQIREQVQNIE
>Mature_299_residues
GALGYHPYFESNMIHSMTAFAADEHLTPWGLLACELRSVNHRFLDIVIRLPEELRALESQLRERVAARVSRGKLDLTVRL
SPQEIHTGKLVVNELLLSHLSTLALRLSAQFPALRVTFAELLQIPGVLKGEQIDMTTLQGHAVALLDKVLDNFIATRERE
GLKMQAMIAQRASAIERIVGEVRTLIPTIREGQHNKLNARMNHLSYPVDHGRIEQELVLWLQKLDVDEELDRLSSHISEL
HRILQQREPVGRRLDFLMQEFNREANTLGSKSVDSRTSNATIELKVLIDQIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=287, Percent_Identity=44.5993031358885, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34200; Mature: 34069

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALGYHPYFESNMIHSMTAFAADEHLTPWGLLACELRSVNHRFLDIVIRLPEELRALES
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QLRERVAARVSRGKLDLTVRLSPQEIHTGKLVVNELLLSHLSTLALRLSAQFPALRVTFA
HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELLQIPGVLKGEQIDMTTLQGHAVALLDKVLDNFIATREREGLKMQAMIAQRASAIERIV
HHHHCCCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GEVRTLIPTIREGQHNKLNARMNHLSYPVDHGRIEQELVLWLQKLDVDEELDRLSSHISE
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LHRILQQREPVGRRLDFLMQEFNREANTLGSKSVDSRTSNATIELKVLIDQIREQVQNIE
HHHHHHHCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GALGYHPYFESNMIHSMTAFAADEHLTPWGLLACELRSVNHRFLDIVIRLPEELRALES
CCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
QLRERVAARVSRGKLDLTVRLSPQEIHTGKLVVNELLLSHLSTLALRLSAQFPALRVTFA
HHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ELLQIPGVLKGEQIDMTTLQGHAVALLDKVLDNFIATREREGLKMQAMIAQRASAIERIV
HHHHCCCCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GEVRTLIPTIREGQHNKLNARMNHLSYPVDHGRIEQELVLWLQKLDVDEELDRLSSHISE
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LHRILQQREPVGRRLDFLMQEFNREANTLGSKSVDSRTSNATIELKVLIDQIREQVQNIE
HHHHHHHCCCHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]