| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is cysH
Identifier: 182681303
GI number: 182681303
Start: 885183
End: 885896
Strand: Reverse
Name: cysH
Synonym: XfasM23_0750
Alternate gene names: 182681303
Gene position: 885896-885183 (Counterclockwise)
Preceding gene: 182681304
Following gene: 182681302
Centisome position: 34.94
GC content: 54.9
Gene sequence:
>714_bases ATGACCGTACTTCCCGCCTTACCTCCTCTGGACGATCTGGAAACGCTCAACGTCCACCTAGAAACGCTGAGTGCTGAAAA TCGCGTGTGCTGGGCACTGGAGCACGGTCCTGACCACCCTGCACTGTCTTCCAGCTTCGGCGCGCAATCGGCCGTCATGC TGCATCTACTCACCCGGTTTGCACCGGATATTACGGTGATCCTGGTCGACACCGGCTATCTTTTCCCAGAAACCTACCGT TTCGCCGACACGCTGACCGAACGACTCAAGCTCAATCTGAAGGTATACCAGCCGCTGCGTAGCGGCGCTTGGACGGAAGC CCGTCATGGTCGACTATGGGAACAAGGGATCGACGGAATTAATCAATACAACACCCTGCACAAGGTCGAACCGATGCGCA GGGCATTAGAGGAATTGCAAGTCGGCACCTGGTTTACCGGCCTACGTCGCGGACAATCCAGTACCCGTACCCAAACATCA ATCGTGCAACGACGTGACGAGCGGTACAAAATCAGTCCAATTGCCGACTGGACCGACCGTGATATCTGGGAATACATGAA ACACCATGATCTGCCCTATCACCCGCTTTGGGAACAGGGCTACGTTTCAATCGGTGACATTCACACGACACGCCCCTTGG AACCAGACATGCGCGAGGAGGACACACGCTTCTTCGGATTCAAACGTGAGTGCGGGATTCACGAGAACATCTAA
Upstream 100 bases:
>100_bases TTCCGAGCGAAGGCTTTGGCGATTTTCTACATCGCACCGGCATCATCGCACTTCCCCCATATCCCACCCACCGACACGTG ATTTCCTCAACGCTGCAAGC
Downstream 100 bases:
>100_bases GGCAGGTGTACATACCGCTACAACACTCTCGAGGATATACGGACATAGGCCTTCAGCCTTATTGTGTCTTCTCAAGACTG AATGCGCATGAGCAACAGCA
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTVLPALPPLDDLETLNVHLETLSAENRVCWALEHGPDHPALSSSFGAQSAVMLHLLTRFAPDITVILVDTGYLFPETYR FADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQSSTRTQTS IVQRRDERYKISPIADWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEPDMREEDTRFFGFKRECGIHENI
Sequences:
>Translated_237_residues MTVLPALPPLDDLETLNVHLETLSAENRVCWALEHGPDHPALSSSFGAQSAVMLHLLTRFAPDITVILVDTGYLFPETYR FADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQSSTRTQTS IVQRRDERYKISPIADWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEPDMREEDTRFFGFKRECGIHENI >Mature_236_residues TVLPALPPLDDLETLNVHLETLSAENRVCWALEHGPDHPALSSSFGAQSAVMLHLLTRFAPDITVILVDTGYLFPETYRF ADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGINQYNTLHKVEPMRRALEELQVGTWFTGLRRGQSSTRTQTSI VQRRDERYKISPIADWTDRDIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEPDMREEDTRFFGFKRECGIHENI
Specific function: Reduction of activated sulfate into sulfite
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily
Homologues:
Organism=Escherichia coli, GI1789121, Length=238, Percent_Identity=56.7226890756302, Blast_Score=288, Evalue=3e-79, Organism=Saccharomyces cerevisiae, GI6325425, Length=220, Percent_Identity=31.8181818181818, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSH_XYLF2 (B2IA30)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001829463.1 - ProteinModelPortal: B2IA30 - SMR: B2IA30 - GeneID: 6202121 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_0750 - HOGENOM: HBG758022 - OMA: QVNPSAK - ProtClustDB: PRK02090 - GO: GO:0005737 - HAMAP: MF_00063 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR011800 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00434 - TIGRFAMs: TIGR02057
Pfam domain/function: PF01507 PAPS_reduct
EC number: =1.8.4.8
Molecular weight: Translated: 27581; Mature: 27449
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLPALPPLDDLETLNVHLETLSAENRVCWALEHGPDHPALSSSFGAQSAVMLHLLTRF CCCCCCCCCCCCCHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH APDITVILVDTGYLFPETYRFADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGI CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECHHHCCCCCCHHCCCHHHHHHCHH NQYNTLHKVEPMRRALEELQVGTWFTGLRRGQSSTRTQTSIVQRRDERYKISPIADWTDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCCCH DIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEPDMREEDTRFFGFKRECGIHENI HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCC >Mature Secondary Structure TVLPALPPLDDLETLNVHLETLSAENRVCWALEHGPDHPALSSSFGAQSAVMLHLLTRF CCCCCCCCCCCCHHHEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH APDITVILVDTGYLFPETYRFADTLTERLKLNLKVYQPLRSGAWTEARHGRLWEQGIDGI CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECHHHCCCCCCHHCCCHHHHHHCHH NQYNTLHKVEPMRRALEELQVGTWFTGLRRGQSSTRTQTSIVQRRDERYKISPIADWTDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCCCH DIWEYMKHHDLPYHPLWEQGYVSIGDIHTTRPLEPDMREEDTRFFGFKRECGIHENI HHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA