Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is engB

Identifier: 182681243

GI number: 182681243

Start: 814703

End: 815362

Strand: Reverse

Name: engB

Synonym: XfasM23_0688

Alternate gene names: 182681243

Gene position: 815362-814703 (Counterclockwise)

Preceding gene: 182681246

Following gene: 182681242

Centisome position: 32.16

GC content: 52.88

Gene sequence:

>660_bases
ATGCCACCAAACGCACAGCACAGCCCGCAGACGTGCGATCCTAAACAGATGTCATCACCACTCGAATGTGCCAAATACCT
CCTCTCAGCCCACACACCCCATCAACTACCGTCCGATGACGGAAGCGAAGTTGCCTTTGCCGGACGTTCTAATGCTGGAA
AATCCAGCGTACTAAACACCTTAACCCGTCAAAACGCACTCGCCCGCGTCTCCAAAACTCCAGGCCGCACCCAGCAACTG
GTCTACTTCACAGTGACACCGCAACGCTACCTGGTTGACCTCCCCGGCTATGGCTACGCCAAAGTCCCCAAAGAACTGCA
AATACACTGGCAAGCATTTATTGACACCTACTTCCATCACCGCCAATCCCTCCGTGGACTGGTGGTGGTAATGGACATTC
GCCACCCACTCAAAGAATACGACCTACAAATGCTCGCCTACGCCAGACAACGCGGCCTACCCGCACAGGCACTACTGACT
AAAGCCGACAAACTCGGCAGAGGCCAACAGGCACAAACACTACAAAAAGTGCGCAATGAACTCACCAAACACTTCGCTGA
CCATATCAACATACAAACCTTCTCCAGCAAATCGCGCCAAGGTGTGGAGCAATTGCATACAGTGATCGAAACCTGGTTAG
GCTTAGCAAGATCCGGCTGA

Upstream 100 bases:

>100_bases
ACAGATCTTCATCCCAGAAAAAACAAGCGCAGATCACAGCAACGAATGATCAAAACTTCTTGTTTGTTTGACCCTCAGAC
CATCCATTAAAACTGTCCTC

Downstream 100 bases:

>100_bases
ATCTAAAAAAACACGCAAACCCATCACAACCCTTTGATTTATATAAAATAGAAAAAATTTTTCACACACAGATAAACACC
CATGCGACACCCCTATAGAA

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQL
VYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLT
KADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG

Sequences:

>Translated_219_residues
MPPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQL
VYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLT
KADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG
>Mature_218_residues
PPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLV
YFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHHRQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTK
ADKLGRGQQAQTLQKVRNELTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG

Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI56549685, Length=163, Percent_Identity=31.2883435582822, Blast_Score=74, Evalue=7e-14,
Organism=Escherichia coli, GI145693205, Length=188, Percent_Identity=53.1914893617021, Blast_Score=198, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6320543, Length=129, Percent_Identity=31.0077519379845, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019987
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 24624; Mature: 24493

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNT
CCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH
LTRQNALARVSKTPGRTQQLVYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHH
HHHHHHHHHHHCCCCCCEEEEEEEECCHHEEEECCCCCCHHCCHHHHHHHHHHHHHHHHH
RQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNE
HHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG
HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPNAQHSPQTCDPKQMSSPLECAKYLLSAHTPHQLPSDDGSEVAFAGRSNAGKSSVLNT
CCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHH
LTRQNALARVSKTPGRTQQLVYFTVTPQRYLVDLPGYGYAKVPKELQIHWQAFIDTYFHH
HHHHHHHHHHHCCCCCCEEEEEEEECCHHEEEECCCCCCHHCCHHHHHHHHHHHHHHHHH
RQSLRGLVVVMDIRHPLKEYDLQMLAYARQRGLPAQALLTKADKLGRGQQAQTLQKVRNE
HHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
LTKHFADHINIQTFSSKSRQGVEQLHTVIETWLGLARSG
HHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]