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The map label for this gene is cyoA [H]

Identifier: 182681212

GI number: 182681212

Start: 780221

End: 781180

Strand: Reverse

Name: cyoA [H]

Synonym: XfasM23_0656

Alternate gene names: 182681212

Gene position: 781180-780221 (Counterclockwise)

Preceding gene: 182681213

Following gene: 182681211

Centisome position: 30.81

GC content: 50.73

Gene sequence:

>960_bases
ATGATTTCCTCGAAACAAACGAGACAGTTACTCCACCTGGTACTCCTGTTGCCGCTCCTCCTGATACTCACGGGGTGCGA
CTGGGCCGTTCTGAACCCAAAGGGTCAGATTGGCCAGGAAGAAAAGACACTACTGATTATTTCAGTCGCGCTGATGCTAC
TGGTTGTCATCCCAGTGATCGTGATGACCGTCGCCTTCGCATGGAAATACCGCGCCTCCAACACCAAAGCGCGCTATGAA
CCAGAATGGGCCCACTCCACTGCAATCGAAGTCGTGGTGTGGTCAATCCCATGTTTGATCATTCTGGTGTTGGCCATACT
GACGTGGCGCTCCTCACACTCACTCGACCCTCACAGACCCCTGAAATCGGATGTTAAACCGATCACCATCGAAGTCGTGG
CGATGGATTGGAAGTGGGGGATGATCTACCCAGAACAGGATATGGCCACAGTCAACGAGATCGCGATCCCAATCAACACC
CCGGTGAATTTCAAGATTACTTCCGATACCGTGATGAACTCGTTTTTCATCCCGCAACTAGGCTCACAAATTTACGCGAT
GGCAGGCATGCAAACCAAATTGCATCTCATCGCCAATGAGACAGGAACATTCCGCGGTATCTCGGCCAACTACAGCGGCC
ATGGCTTCTCCAAAATGAATTTTGTAGTCCATGTGCTCCCCGACCAGGCGGCATTCGACGCCTGGGTCGCCAAAGTCAAA
ACCTCACCGCTAAAACTACAACAGGATGAATATCAAGCATTGGCAGATGATCGCAACGAAAAAAGTGATTATCCGGTCAC
CTACTACTCATCGGTAGAGAATGGACTGTTTAAGTCACTGATCGATAAGCACATGATGGGGCATGGCCACCACGCCGACG
ATCACGACAATCATCATGAGCACCAGTTATCGCTGGAAGATTCGGTGAGCATGTGCACTTCTGGAGGCAAACAATGTTAG

Upstream 100 bases:

>100_bases
AGTGTGACCCCACTGCTGCTCATACCGCAGTCTCCCGTGTGACCAATGACAAATCGCACTCAGAGCTGCAATTGATGCTT
CCTTGCAACTGGATTGACCA

Downstream 100 bases:

>100_bases
GCAAGCTTTCGTGGGATGCAATCCCCTACGACCCAATCGTTTTGACTGCAGTCGGGGGAGGCGGTCTCGCCATCCTAGGG
GTCATGATTGCGATCACCTA

Product: ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MISSKQTRQLLHLVLLLPLLLILTGCDWAVLNPKGQIGQEEKTLLIISVALMLLVVIPVIVMTVAFAWKYRASNTKARYE
PEWAHSTAIEVVVWSIPCLIILVLAILTWRSSHSLDPHRPLKSDVKPITIEVVAMDWKWGMIYPEQDMATVNEIAIPINT
PVNFKITSDTVMNSFFIPQLGSQIYAMAGMQTKLHLIANETGTFRGISANYSGHGFSKMNFVVHVLPDQAAFDAWVAKVK
TSPLKLQQDEYQALADDRNEKSDYPVTYYSSVENGLFKSLIDKHMMGHGHHADDHDNHHEHQLSLEDSVSMCTSGGKQC

Sequences:

>Translated_319_residues
MISSKQTRQLLHLVLLLPLLLILTGCDWAVLNPKGQIGQEEKTLLIISVALMLLVVIPVIVMTVAFAWKYRASNTKARYE
PEWAHSTAIEVVVWSIPCLIILVLAILTWRSSHSLDPHRPLKSDVKPITIEVVAMDWKWGMIYPEQDMATVNEIAIPINT
PVNFKITSDTVMNSFFIPQLGSQIYAMAGMQTKLHLIANETGTFRGISANYSGHGFSKMNFVVHVLPDQAAFDAWVAKVK
TSPLKLQQDEYQALADDRNEKSDYPVTYYSSVENGLFKSLIDKHMMGHGHHADDHDNHHEHQLSLEDSVSMCTSGGKQC
>Mature_319_residues
MISSKQTRQLLHLVLLLPLLLILTGCDWAVLNPKGQIGQEEKTLLIISVALMLLVVIPVIVMTVAFAWKYRASNTKARYE
PEWAHSTAIEVVVWSIPCLIILVLAILTWRSSHSLDPHRPLKSDVKPITIEVVAMDWKWGMIYPEQDMATVNEIAIPINT
PVNFKITSDTVMNSFFIPQLGSQIYAMAGMQTKLHLIANETGTFRGISANYSGHGFSKMNFVVHVLPDQAAFDAWVAKVK
TSPLKLQQDEYQALADDRNEKSDYPVTYYSSVENGLFKSLIDKHMMGHGHHADDHDNHHEHQLSLEDSVSMCTSGGKQC

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=298, Percent_Identity=55.3691275167785, Blast_Score=338, Evalue=2e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 35776; Mature: 35776

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSKQTRQLLHLVLLLPLLLILTGCDWAVLNPKGQIGQEEKTLLIISVALMLLVVIPVI
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VMTVAFAWKYRASNTKARYEPEWAHSTAIEVVVWSIPCLIILVLAILTWRSSHSLDPHRP
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LKSDVKPITIEVVAMDWKWGMIYPEQDMATVNEIAIPINTPVNFKITSDTVMNSFFIPQL
CHHCCCEEEEEEEEEECCCCEEECCHHHHHHHHEEEEECCCEEEEEECHHHHHHHHHHHH
GSQIYAMAGMQTKLHLIANETGTFRGISANYSGHGFSKMNFVVHVLPDQAAFDAWVAKVK
HHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHC
TSPLKLQQDEYQALADDRNEKSDYPVTYYSSVENGLFKSLIDKHMMGHGHHADDHDNHHE
CCCCEECHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
HQLSLEDSVSMCTSGGKQC
HEECHHHHHHHHHCCCCCC
>Mature Secondary Structure
MISSKQTRQLLHLVLLLPLLLILTGCDWAVLNPKGQIGQEEKTLLIISVALMLLVVIPVI
CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VMTVAFAWKYRASNTKARYEPEWAHSTAIEVVVWSIPCLIILVLAILTWRSSHSLDPHRP
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LKSDVKPITIEVVAMDWKWGMIYPEQDMATVNEIAIPINTPVNFKITSDTVMNSFFIPQL
CHHCCCEEEEEEEEEECCCCEEECCHHHHHHHHEEEEECCCEEEEEECHHHHHHHHHHHH
GSQIYAMAGMQTKLHLIANETGTFRGISANYSGHGFSKMNFVVHVLPDQAAFDAWVAKVK
HHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCCHHHHHHHHHHC
TSPLKLQQDEYQALADDRNEKSDYPVTYYSSVENGLFKSLIDKHMMGHGHHADDHDNHHE
CCCCEECHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
HQLSLEDSVSMCTSGGKQC
HEECHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]