Click here to switch to the map view.

The map label for this gene is 182681133

Identifier: 182681133

GI number: 182681133

Start: 684805

End: 685389

Strand: Direct

Name: 182681133

Synonym: XfasM23_0575

Alternate gene names: NA

Gene position: 684805-685389 (Clockwise)

Preceding gene: 182681129

Following gene: 182681138

Centisome position: 27.01

GC content: 52.99

Gene sequence:

>585_bases
ATGGATCTGTTTCCGTTTTTGCCAGGTGTGCGGATTTCTCTGCAGTCGGGATGGTTGCCATCCGGTGCGGCTGATGCCTT
GTTGGCAGGTCTGCTTGAAGGGGTTCCTTGGGAAGTCCATCGCATCCACATCTTTGGCCGTGAGGTGAATTCGCCGCGAT
TGTCATGTTGGGTGGGAGATCCGCAGGCCAGTTATCGTTATTCGGGAAGATGCTTTCAGCCCCGTCCGTGGTGGCCGGCG
TTAGCTGAGCTGCGTATGTGTTTAGAGGGTGAAACGGGTGCTGTTTTTAACAGTGTTTTGCTTAATCGTTATCGTCATGG
TGGTGATGCGATCGGTTGGCATAGTGACGATGAAGCGGAACTTGGTATAGATCCTCTGATTGCATCAGTTAGCTTGGGGG
CTTCACGCCGTTTTGTGTTCCGACATCGGAGGGAGCGTCATTTGCGTGCTGAATGCGTTCTCAGTCATGGTGATTTGTTG
CTGATGGGAGGGACGACTCAGCGTGACTATCAGCATGCTTTACCACGCACTTTGAGGGTGGTAGGTGAGCGGGTGAATCT
GACGTTCCGGCGTATCCTGATGTGA

Upstream 100 bases:

>100_bases
TCCTGAAATAAGCGTGATAGCTTTTGATTATTTTCCTGGAGTTCTGTAATAGCAGCAAATGACTGCTGTGTCCTGGTTTG
TCGTGTTAGGGGGATTTGTC

Downstream 100 bases:

>100_bases
TGTTTGTGATTTGGTCAGATGATCTAGGGATGTTGCGGGGTGTTTTTAATGGTGTAGTGGGGCGCGTCTAGCAGTTTGCT
TCTTGCTTGGTTGAAGTTGA

Product: DNA repair system specific for alkylated DNA

Products: NA

Alternate protein names: Alkylated DNA Repair Protein; DNA-N1-Methyladenine Dioxygenase; DNA Repair System Specific For Alkylated DNA; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Alkylated DNA Repair Protein-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; CRISPR-Associated Family Protein; DNA Repair System Specific For Alkylated DNA Protein; 2OG-Fe(II) Oxygenase Family Protein; DNA Repair System Protein; Alkylated DNA Repair Protein AlkB

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDLFPFLPGVRISLQSGWLPSGAADALLAGLLEGVPWEVHRIHIFGREVNSPRLSCWVGDPQASYRYSGRCFQPRPWWPA
LAELRMCLEGETGAVFNSVLLNRYRHGGDAIGWHSDDEAELGIDPLIASVSLGASRRFVFRHRRERHLRAECVLSHGDLL
LMGGTTQRDYQHALPRTLRVVGERVNLTFRRILM

Sequences:

>Translated_194_residues
MDLFPFLPGVRISLQSGWLPSGAADALLAGLLEGVPWEVHRIHIFGREVNSPRLSCWVGDPQASYRYSGRCFQPRPWWPA
LAELRMCLEGETGAVFNSVLLNRYRHGGDAIGWHSDDEAELGIDPLIASVSLGASRRFVFRHRRERHLRAECVLSHGDLL
LMGGTTQRDYQHALPRTLRVVGERVNLTFRRILM
>Mature_194_residues
MDLFPFLPGVRISLQSGWLPSGAADALLAGLLEGVPWEVHRIHIFGREVNSPRLSCWVGDPQASYRYSGRCFQPRPWWPA
LAELRMCLEGETGAVFNSVLLNRYRHGGDAIGWHSDDEAELGIDPLIASVSLGASRRFVFRHRRERHLRAECVLSHGDLL
LMGGTTQRDYQHALPRTLRVVGERVNLTFRRILM

Specific function: Unknown

COG id: COG3145

COG function: function code L; Alkylated DNA repair protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224451107, Length=181, Percent_Identity=41.9889502762431, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI48717226, Length=181, Percent_Identity=41.9889502762431, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI224451103, Length=181, Percent_Identity=41.9889502762431, Blast_Score=129, Evalue=2e-30,
Organism=Homo sapiens, GI21040275, Length=191, Percent_Identity=38.7434554973822, Blast_Score=124, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21954; Mature: 21954

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFPFLPGVRISLQSGWLPSGAADALLAGLLEGVPWEVHRIHIFGREVNSPRLSCWVGD
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECC
PQASYRYSGRCFQPRPWWPALAELRMCLEGETGAVFNSVLLNRYRHGGDAIGWHSDDEAE
CCCCCEECCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LGIDPLIASVSLGASRRFVFRHRRERHLRAECVLSHGDLLLMGGTTQRDYQHALPRTLRV
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHH
VGERVNLTFRRILM
HHHHHCHHHHHHCC
>Mature Secondary Structure
MDLFPFLPGVRISLQSGWLPSGAADALLAGLLEGVPWEVHRIHIFGREVNSPRLSCWVGD
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEECC
PQASYRYSGRCFQPRPWWPALAELRMCLEGETGAVFNSVLLNRYRHGGDAIGWHSDDEAE
CCCCCEECCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
LGIDPLIASVSLGASRRFVFRHRRERHLRAECVLSHGDLLLMGGTTQRDYQHALPRTLRV
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEECCCCEEEECCCCCHHHHHHHHHHHHH
VGERVNLTFRRILM
HHHHHCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA