| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182681138
Identifier: 182681138
GI number: 182681138
Start: 689216
End: 690478
Strand: Direct
Name: 182681138
Synonym: XfasM23_0580
Alternate gene names: NA
Gene position: 689216-690478 (Clockwise)
Preceding gene: 182681133
Following gene: 182681139
Centisome position: 27.18
GC content: 52.57
Gene sequence:
>1263_bases ATGTCTTCTGCCCCTCTTCTTTCACCTGCCCTTTCCACCAGCTATGCACAGCGTGTTGCGTTTGTCGCTGAGATTGCCGG ACGCCTGCATACATATGGCACCACCGCACAGCGGCTGGAGGCATCTTTGGTGGCGCTGAGCCAGCAACTTGGATTGGATT GTGAACCATGGTCCAATCCAACGGGCATCATTCTCAGCTTTAGTGATCCAGCCAAGGCAATCGGTTCAAGTGATATTACC CGCGTGATCCGGTTGGCACCGGGGGAGAACGACTTGTACAAGCTCAGCGTGGCTGACAATGTTGCTCAAGCAGTTGCTTC TGGACGCATGAGTATCTCTCAGGGACACACTACATTGCGCCGGTTGGATCGTGAGTTGGATCGACGTTCCAAGATGATGC GCGTGTTCGGTTTTGGGCTGGCTGCTGGTGGTGTTGCTGGGTTATGGAAGCTGCCGTGGCTGGATGTCGCTACTGCTGCG ACGGTTGGTTTGTTGATTGGCCTGCTGACACAGTATACCGATCACCGTGCTGCTACTCGTGAGGCCAGTGAGGCATTGGC CGCGTTGCTGGCTGGTTTTGTTGCGACGTTGGTAGCCACGCTGATTGGTCCGATCAATCTGAATACGGTGATTATTGCTT CTGTGGTGGTATTACTGCCAGGTATGTCACTGACAAACGCTGTGAACGAATTATCAAGTCAGCATTGGGTCTCAGGTACA GCGCGGTTGGCTGGTGCATTGACTGTGGTATTCAAGCTTACAGTCGGGGCTTTGATCGCATTGAGTTTGTGCAAGCTGAT TGGGCTAAAACCGCAAATATACGTAGCGCAGCCTCAACCACAATGGGTTGAATGGGTGGCATTGTTGACCACCGCGTATG GGTTTGCTGTGCTGTTCAAGGCACGCTTTCGCGATTACCCATGGGTGATGGCGGCTGCTATGGCTGGTTATGTGATCGCA CGCTATGCCGGGAAATTAAGTGGTAATGCCGAAGAAGGTGTTTTCCTGTCAGCAATGGTACTGACTGCAGCAGGCAATTT GTTTGGTCGCTTAATGCCCAAACCTGGCGCCTTGATCCGCTTGCCAGGCATCATCATGTTGGTACCAGGGAGTACCAGTA TGCGTGGATTTATGGATGTGGTTGAACATCAAAGCATCCATGTGGGCCAGGACGAATTGCTAGGCGTAACGAATGTGGTG ATGGCGCTTGTGGCTGGTTTGCTGTTTGGTAACCTCCTGATACCAACGCGTAAGAACCTGTAG
Upstream 100 bases:
>100_bases GTAAGCATAACCGGTTCCGCGTGAAGTACGAAGGTCGATCTTCACGTCAGAGGCGACATACACTGACTCTCTTCGCTATT CGTGCCTTTTTGTCCGACGC
Downstream 100 bases:
>100_bases CAACGTGCCGAAAGGTCTCATATTCTGCTTATGTCAAGGACGTTTTATTGATTGCGCTGTAAGCAATTCTGTTAGTAGTA GAGATTAAGATTTTTGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSSAPLLSPALSTSYAQRVAFVAEIAGRLHTYGTTAQRLEASLVALSQQLGLDCEPWSNPTGIILSFSDPAKAIGSSDIT RVIRLAPGENDLYKLSVADNVAQAVASGRMSISQGHTTLRRLDRELDRRSKMMRVFGFGLAAGGVAGLWKLPWLDVATAA TVGLLIGLLTQYTDHRAATREASEALAALLAGFVATLVATLIGPINLNTVIIASVVVLLPGMSLTNAVNELSSQHWVSGT ARLAGALTVVFKLTVGALIALSLCKLIGLKPQIYVAQPQPQWVEWVALLTTAYGFAVLFKARFRDYPWVMAAAMAGYVIA RYAGKLSGNAEEGVFLSAMVLTAAGNLFGRLMPKPGALIRLPGIIMLVPGSTSMRGFMDVVEHQSIHVGQDELLGVTNVV MALVAGLLFGNLLIPTRKNL
Sequences:
>Translated_420_residues MSSAPLLSPALSTSYAQRVAFVAEIAGRLHTYGTTAQRLEASLVALSQQLGLDCEPWSNPTGIILSFSDPAKAIGSSDIT RVIRLAPGENDLYKLSVADNVAQAVASGRMSISQGHTTLRRLDRELDRRSKMMRVFGFGLAAGGVAGLWKLPWLDVATAA TVGLLIGLLTQYTDHRAATREASEALAALLAGFVATLVATLIGPINLNTVIIASVVVLLPGMSLTNAVNELSSQHWVSGT ARLAGALTVVFKLTVGALIALSLCKLIGLKPQIYVAQPQPQWVEWVALLTTAYGFAVLFKARFRDYPWVMAAAMAGYVIA RYAGKLSGNAEEGVFLSAMVLTAAGNLFGRLMPKPGALIRLPGIIMLVPGSTSMRGFMDVVEHQSIHVGQDELLGVTNVV MALVAGLLFGNLLIPTRKNL >Mature_419_residues SSAPLLSPALSTSYAQRVAFVAEIAGRLHTYGTTAQRLEASLVALSQQLGLDCEPWSNPTGIILSFSDPAKAIGSSDITR VIRLAPGENDLYKLSVADNVAQAVASGRMSISQGHTTLRRLDRELDRRSKMMRVFGFGLAAGGVAGLWKLPWLDVATAAT VGLLIGLLTQYTDHRAATREASEALAALLAGFVATLVATLIGPINLNTVIIASVVVLLPGMSLTNAVNELSSQHWVSGTA RLAGALTVVFKLTVGALIALSLCKLIGLKPQIYVAQPQPQWVEWVALLTTAYGFAVLFKARFRDYPWVMAAAMAGYVIAR YAGKLSGNAEEGVFLSAMVLTAAGNLFGRLMPKPGALIRLPGIIMLVPGSTSMRGFMDVVEHQSIHVGQDELLGVTNVVM ALVAGLLFGNLLIPTRKNL
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44547; Mature: 44416
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAPLLSPALSTSYAQRVAFVAEIAGRLHTYGTTAQRLEASLVALSQQLGLDCEPWSNP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TGIILSFSDPAKAIGSSDITRVIRLAPGENDLYKLSVADNVAQAVASGRMSISQGHTTLR CEEEEECCCHHHHHCCHHHHHHHEECCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHH RLDRELDRRSKMMRVFGFGLAAGGVAGLWKLPWLDVATAATVGLLIGLLTQYTDHRAATR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EASEALAALLAGFVATLVATLIGPINLNTVIIASVVVLLPGMSLTNAVNELSSQHWVSGT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ARLAGALTVVFKLTVGALIALSLCKLIGLKPQIYVAQPQPQWVEWVALLTTAYGFAVLFK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH ARFRDYPWVMAAAMAGYVIARYAGKLSGNAEEGVFLSAMVLTAAGNLFGRLMPKPGALIR HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE LPGIIMLVPGSTSMRGFMDVVEHQSIHVGQDELLGVTNVVMALVAGLLFGNLLIPTRKNL CCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSAPLLSPALSTSYAQRVAFVAEIAGRLHTYGTTAQRLEASLVALSQQLGLDCEPWSNP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TGIILSFSDPAKAIGSSDITRVIRLAPGENDLYKLSVADNVAQAVASGRMSISQGHTTLR CEEEEECCCHHHHHCCHHHHHHHEECCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHH RLDRELDRRSKMMRVFGFGLAAGGVAGLWKLPWLDVATAATVGLLIGLLTQYTDHRAATR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EASEALAALLAGFVATLVATLIGPINLNTVIIASVVVLLPGMSLTNAVNELSSQHWVSGT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ARLAGALTVVFKLTVGALIALSLCKLIGLKPQIYVAQPQPQWVEWVALLTTAYGFAVLFK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH ARFRDYPWVMAAAMAGYVIARYAGKLSGNAEEGVFLSAMVLTAAGNLFGRLMPKPGALIR HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEE LPGIIMLVPGSTSMRGFMDVVEHQSIHVGQDELLGVTNVVMALVAGLLFGNLLIPTRKNL CCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA