Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681114
Identifier: 182681114
GI number: 182681114
Start: 662779
End: 663057
Strand: Reverse
Name: 182681114
Synonym: XfasM23_0556
Alternate gene names: NA
Gene position: 663057-662779 (Counterclockwise)
Preceding gene: 182681115
Following gene: 182681113
Centisome position: 26.15
GC content: 54.84
Gene sequence:
>279_bases ATGGAAATTAAGTCCGATCATTCTGAGCATGGTTTTCAGTTCCCCGGTACGTTCGAGTTGAGCGTGGTAGGGACGGCAGG TAAGGCGCTGGAGACGGAGTTACCGCGGTTACTTGCGCTATGCGGGGTGGAACTGGTGCAAGAGCGTATCAGTTGGAAAC ATTCGTCAACCGGGAAGTATGTGTCGGTGCGGATTGGCTTCCGTGCGCTGGATCGGGAGCAATATGACGCTGCTCACCAA GTGCTGCGTGATCATCCGGAAGTGAAGTGGACGCTGTGA
Upstream 100 bases:
>100_bases TGCTTATCACTTACGCTGAGTGTGAGCTAGGTCAGGTTGGAGTTTTTCCTTAGGTGCTTGTGGGCTTGGGTTTGTTCTGA GTTGGTCTGATAATGGCGAG
Downstream 100 bases:
>100_bases ATGCGTGTGGTGCTGTTGCGCCCTGGCATGTTGGCCGTGCCGCGCTGCTGCGTATGCTGGGTGCTCAGCCTTATGTGCCG GTTTGGCATGCGATGCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MEIKSDHSEHGFQFPGTFELSVVGTAGKALETELPRLLALCGVELVQERISWKHSSTGKYVSVRIGFRALDREQYDAAHQ VLRDHPEVKWTL
Sequences:
>Translated_92_residues MEIKSDHSEHGFQFPGTFELSVVGTAGKALETELPRLLALCGVELVQERISWKHSSTGKYVSVRIGFRALDREQYDAAHQ VLRDHPEVKWTL >Mature_92_residues MEIKSDHSEHGFQFPGTFELSVVGTAGKALETELPRLLALCGVELVQERISWKHSSTGKYVSVRIGFRALDREQYDAAHQ VLRDHPEVKWTL
Specific function: Unknown
COG id: COG2921
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0250 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007454 [H]
Pfam domain/function: PF04359 DUF493 [H]
EC number: NA
Molecular weight: Translated: 10435; Mature: 10435
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIKSDHSEHGFQFPGTFELSVVGTAGKALETELPRLLALCGVELVQERISWKHSSTGKY CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VSVRIGFRALDREQYDAAHQVLRDHPEVKWTL EEEEECCCHHCHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure MEIKSDHSEHGFQFPGTFELSVVGTAGKALETELPRLLALCGVELVQERISWKHSSTGKY CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE VSVRIGFRALDREQYDAAHQVLRDHPEVKWTL EEEEECCCHHCHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]