Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182681115
Identifier: 182681115
GI number: 182681115
Start: 663222
End: 664025
Strand: Reverse
Name: 182681115
Synonym: XfasM23_0557
Alternate gene names: NA
Gene position: 664025-663222 (Counterclockwise)
Preceding gene: 182681116
Following gene: 182681114
Centisome position: 26.19
GC content: 54.73
Gene sequence:
>804_bases GTGGTGAGTATTTTGAAAATTCATTTTTCTCAGCAGCAACAACCTGATCATACGCTCTCTCCGGGGGTGCATCGCATCGT CAGGCATGCGTCCGGAGTCGTTGCCTTTGCCGATGAGGTTCAGGGGCGTGGCGTCGTGTTGGCGCAATTCTCCTTGGATA ACCGCGGTCTTTGGTTACAGGTGGCTAAAGGTATTCGTGGTATCCATGTTAATGGCCGCCCGGTGCGGCGTATGGCATGG TTGCGTGTCGGCGATGCTGTGTATGCCGATGGTGTGGAAATGCTTGTGATAGGTATTCAAGCTGAGCCACCCGATGATGC AACCGCTACGCTTGATCGGAATTGCTTGGTGTTGCGTGGTGTTGGTGGACGTCACTATGGGCGTAGCTTCACTCTGGAAA CACCGCGTATCGTCGGGCAAGAGGCGGGGGTTGATATTTGGATTGATGATCCGGTTTTCGCGGCCCGTCATGCGGTGTTT GAGCGGCATGGTGATCGGGTGTTATTGCGCGATCTTGGTTCAGAGGAGGGGAGCGTGGTTAATGGTTGCAAGGTCCGCGA TGCTTGGTTGCAGGCGGGTGATCAGATTGTGCTTGATGGTCAGCACCGTTTTGTACTGGAGAGTCCGCTTTTTTTATTGT TGCCACTGTCATGTTCGATGTCGGAGGACGTCGCTGCCCCGATACCACCGGCTGCTGTGTCTGTTAGAACGCCGCGTCGT ACTGCACGTTGGCCGTGGTTGTTGTTGAGTGCGTTACTTCTGGCGACAGCGCTTGGCGCGTTGTTATGGTTCGATGTGCG CTGA
Upstream 100 bases:
>100_bases GTGAACGTATCGTGTTTGGCCAGTCGTCTTGATGCCGCCAGTGCCATGTACTTTAAGAGGCTTGTGCTTCAGCAAGTGGG GCCAAATTGCTAGGCTCCCC
Downstream 100 bases:
>100_bases CCATCCAGAATCATCGTAAAGATTCGGAGTGCATGGGGTTTAAGACATTGGGTGGCTTCAATATTGCTTATCACTTACGC TGAGTGTGAGCTAGGTCAGG
Product: FHA domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MVSILKIHFSQQQQPDHTLSPGVHRIVRHASGVVAFADEVQGRGVVLAQFSLDNRGLWLQVAKGIRGIHVNGRPVRRMAW LRVGDAVYADGVEMLVIGIQAEPPDDATATLDRNCLVLRGVGGRHYGRSFTLETPRIVGQEAGVDIWIDDPVFAARHAVF ERHGDRVLLRDLGSEEGSVVNGCKVRDAWLQAGDQIVLDGQHRFVLESPLFLLLPLSCSMSEDVAAPIPPAAVSVRTPRR TARWPWLLLSALLLATALGALLWFDVR
Sequences:
>Translated_267_residues MVSILKIHFSQQQQPDHTLSPGVHRIVRHASGVVAFADEVQGRGVVLAQFSLDNRGLWLQVAKGIRGIHVNGRPVRRMAW LRVGDAVYADGVEMLVIGIQAEPPDDATATLDRNCLVLRGVGGRHYGRSFTLETPRIVGQEAGVDIWIDDPVFAARHAVF ERHGDRVLLRDLGSEEGSVVNGCKVRDAWLQAGDQIVLDGQHRFVLESPLFLLLPLSCSMSEDVAAPIPPAAVSVRTPRR TARWPWLLLSALLLATALGALLWFDVR >Mature_267_residues MVSILKIHFSQQQQPDHTLSPGVHRIVRHASGVVAFADEVQGRGVVLAQFSLDNRGLWLQVAKGIRGIHVNGRPVRRMAW LRVGDAVYADGVEMLVIGIQAEPPDDATATLDRNCLVLRGVGGRHYGRSFTLETPRIVGQEAGVDIWIDDPVFAARHAVF ERHGDRVLLRDLGSEEGSVVNGCKVRDAWLQAGDQIVLDGQHRFVLESPLFLLLPLSCSMSEDVAAPIPPAAVSVRTPRR TARWPWLLLSALLLATALGALLWFDVR
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29344; Mature: 29344
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSILKIHFSQQQQPDHTLSPGVHRIVRHASGVVAFADEVQGRGVVLAQFSLDNRGLWLQ CEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCCEEEE VAKGIRGIHVNGRPVRRMAWLRVGDAVYADGVEMLVIGIQAEPPDDATATLDRNCLVLRG EECCCCEEEECCCCHHHEEEEEECCHHHHCCEEEEEEEEECCCCCCCCEEECCCEEEEEC VGGRHYGRSFTLETPRIVGQEAGVDIWIDDPVFAARHAVFERHGDRVLLRDLGSEEGSVV CCCCCCCCEEEECCCHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCEE NGCKVRDAWLQAGDQIVLDGQHRFVLESPLFLLLPLSCSMSEDVAAPIPPAAVSVRTPRR CCCEEEHHHHHCCCEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCC TARWPWLLLSALLLATALGALLWFDVR CCCCHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure MVSILKIHFSQQQQPDHTLSPGVHRIVRHASGVVAFADEVQGRGVVLAQFSLDNRGLWLQ CEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCEEEEEEEECCCCCEEEE VAKGIRGIHVNGRPVRRMAWLRVGDAVYADGVEMLVIGIQAEPPDDATATLDRNCLVLRG EECCCCEEEECCCCHHHEEEEEECCHHHHCCEEEEEEEEECCCCCCCCEEECCCEEEEEC VGGRHYGRSFTLETPRIVGQEAGVDIWIDDPVFAARHAVFERHGDRVLLRDLGSEEGSVV CCCCCCCCEEEECCCHHCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCEE NGCKVRDAWLQAGDQIVLDGQHRFVLESPLFLLLPLSCSMSEDVAAPIPPAAVSVRTPRR CCCEEEHHHHHCCCEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCC TARWPWLLLSALLLATALGALLWFDVR CCCCHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA