Click here to switch to the map view.

The map label for this gene is yhdE [C]

Identifier: 182680970

GI number: 182680970

Start: 509956

End: 510525

Strand: Direct

Name: yhdE [C]

Synonym: XfasM23_0408

Alternate gene names: 182680970

Gene position: 509956-510525 (Clockwise)

Preceding gene: 182680967

Following gene: 182680971

Centisome position: 20.11

GC content: 57.19

Gene sequence:

>570_bases
ATGCTCTATCTCGCCTCCCGTTCGCTGTGCCGTCGGCAATTATTGCAACGCTTGGATATTCCATTCCAAGTCATTGATCT
AGAGATTCCTGAGGTGCGTAGGGAGGACGAACTTCCCCAGGATTATGTGCGCCGTGTGGCGCAAGAGAAGGCGCAGGTGG
GGTTGGCAAGGGTGGGGGATGCGTTTGCGCCGAAGGTGTTGGGTGCGGATACCGAGGTGGTGTTGGATGGCCGCGTCTTC
GGTAAGCCGGTCGATTTGGCTGAAGCGGCAACGATGTTGGCCGCTTTATCTGGGCGTACTCATCAGGTGATGACGGCGGT
GTCGTTGGTGGCGGCTGGAGGTGTGGCAGCGCAGGTATTGGTGGTTTCGGAGGTGAGTTTTGCGTTGTTGAGTCAGGGAC
AGATCGCGCGTTACGTGGACAGTGGTGAGCCGATGGGGAAGGCTGGTGCATATGCTATCCAAGGACGAGGGGAGTGTTTC
GTCAGCCGTTTGGTCGGTAGTTATTCTGGGGTGATGGGGTTACCGCTACAGCAAACCGCTCAGTTGCTGGCTACGTTCGA
GGAGAGTTAG

Upstream 100 bases:

>100_bases
TGAATACACTGTGAGTCAGTGAGATGTGTCGCTAATGAATAAATTGTGATCTGAGAAGGGTAACGTAAGTTTGGTATGCG
CGCGGGTTATTCTTCCACGT

Downstream 100 bases:

>100_bases
ATGTCAGAGGAGATCTTAGTTAACGTGACTTTTGGTGAAACGCGTGTGGCAGTCGTTGAAAACGGTTTGCTTCAGGAGTT
GCACATTGAGCGCGATGGGT

Product: Maf-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MLYLASRSLCRRQLLQRLDIPFQVIDLEIPEVRREDELPQDYVRRVAQEKAQVGLARVGDAFAPKVLGADTEVVLDGRVF
GKPVDLAEAATMLAALSGRTHQVMTAVSLVAAGGVAAQVLVVSEVSFALLSQGQIARYVDSGEPMGKAGAYAIQGRGECF
VSRLVGSYSGVMGLPLQQTAQLLATFEES

Sequences:

>Translated_189_residues
MLYLASRSLCRRQLLQRLDIPFQVIDLEIPEVRREDELPQDYVRRVAQEKAQVGLARVGDAFAPKVLGADTEVVLDGRVF
GKPVDLAEAATMLAALSGRTHQVMTAVSLVAAGGVAAQVLVVSEVSFALLSQGQIARYVDSGEPMGKAGAYAIQGRGECF
VSRLVGSYSGVMGLPLQQTAQLLATFEES
>Mature_189_residues
MLYLASRSLCRRQLLQRLDIPFQVIDLEIPEVRREDELPQDYVRRVAQEKAQVGLARVGDAFAPKVLGADTEVVLDGRVF
GKPVDLAEAATMLAALSGRTHQVMTAVSLVAAGGVAAQVLVVSEVSFALLSQGQIARYVDSGEPMGKAGAYAIQGRGECF
VSRLVGSYSGVMGLPLQQTAQLLATFEES

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=192, Percent_Identity=36.4583333333333, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI291045181, Length=132, Percent_Identity=41.6666666666667, Blast_Score=85, Evalue=3e-17,
Organism=Homo sapiens, GI310133124, Length=132, Percent_Identity=41.6666666666667, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI291045183, Length=189, Percent_Identity=32.2751322751323, Blast_Score=76, Evalue=2e-14,
Organism=Escherichia coli, GI1789646, Length=186, Percent_Identity=49.4623655913978, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI87081830, Length=184, Percent_Identity=35.8695652173913, Blast_Score=93, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193202443, Length=191, Percent_Identity=29.3193717277487, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI78706856, Length=180, Percent_Identity=36.1111111111111, Blast_Score=97, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 20251; Mature: 20251

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLASRSLCRRQLLQRLDIPFQVIDLEIPEVRREDELPQDYVRRVAQEKAQVGLARVGD
CEEECHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
AFAPKVLGADTEVVLDGRVFGKPVDLAEAATMLAALSGRTHQVMTAVSLVAAGGVAAQVL
HHCCHHCCCCCEEEECCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
VVSEVSFALLSQGQIARYVDSGEPMGKAGAYAIQGRGECFVSRLVGSYSGVMGLPLQQTA
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHH
QLLATFEES
HHHHHHCCC
>Mature Secondary Structure
MLYLASRSLCRRQLLQRLDIPFQVIDLEIPEVRREDELPQDYVRRVAQEKAQVGLARVGD
CEEECHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
AFAPKVLGADTEVVLDGRVFGKPVDLAEAATMLAALSGRTHQVMTAVSLVAAGGVAAQVL
HHCCHHCCCCCEEEECCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
VVSEVSFALLSQGQIARYVDSGEPMGKAGAYAIQGRGECFVSRLVGSYSGVMGLPLQQTA
HHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHH
QLLATFEES
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]