Click here to switch to the map view.

The map label for this gene is 182680917

Identifier: 182680917

GI number: 182680917

Start: 453870

End: 454559

Strand: Reverse

Name: 182680917

Synonym: XfasM23_0355

Alternate gene names: NA

Gene position: 454559-453870 (Counterclockwise)

Preceding gene: 182680918

Following gene: 182680902

Centisome position: 17.93

GC content: 57.97

Gene sequence:

>690_bases
ATGGCTGCCGAACATGGCATGACCTGGGCGATCTCCCCGTCGCTCACAGGCGTCGCGCTACCCCACATTGATCAGACAGA
AGAATCAGATATCAACGTCCTGCTACGGCTAGCACAGCGTTACGATGCGATTGCTAAACCTGCCGGAGGTCGACTGATCT
TTGCCAAACGCGGCGAAGCTAAAAGCGTCACAGGCATTGATATGCCACGCATCACCTTAACACCTGATGAGATTGCCTCC
TGGCAAATGACCTACGCAACGCGGGACAGCCCCGGCACAGTGATTGCCTTCTATCGCCTGGCACGCCGCGCTGAACTGCA
TCAAGTCAGTGTCGGTGACGGGCATCCCGTTCACCGCATCAAACAATACCTGCCTGATGCCGCCGCCGCCATCGCTGCTG
CTCGGGGTGAACTCTCACGCCGCGCCCGCGCTGAAACCAAACTCACTCTAGAGATGGCAGGGCGTGCGGAGCTGTCCGCA
GAAGCCGTCTTGACACTCAACGGCTGGCGGGAAGGAGTGAATGGTGATTGGCTCGTCACCCGTGTGCAACATGGCCTAGA
CAAAAACGGCTACCGATGTAGCATCGAAGCCGAGCGGCCCAACAACCATCCAGATGTTGCTGCCGCCATCAACACGCAAG
TACGCGATCAAGTCGTACGCCCGTCCCGCACCCATCATCAGAAAACATAG

Upstream 100 bases:

>100_bases
GTGAAAAAAACAGGAAGCCTCATGACAGGCTCGCTCCAATCCCAAGGCACCCTGATTGGTGACTCCCACCGGAACCACAC
TCGGTGCCATGCTATCCACA

Downstream 100 bases:

>100_bases
GGGCCTGCTATCGGTTCCGCATTTTCTGATACCTCAATGCGGCATTTTCCGATACCACCACCCCCACCGCGTCCAGCATA
TTAACCCTGCCGGACGCGGG

Product: late control D family protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Tail Protein D; Phage Late Control Gene D Protein; Phage-Related Tail Protein; Phage Protein D; Fels-2 Prophage Protein; Phage Late Control; Pyocin R2_PP Tail Formation; Late Control Gene D Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Phage Protein D-Like; Phage Late Control Gene D Protein GpD; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Regulator Of Late Gene Expression; Phage-Related Late Control Gene Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MAAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAGGRLIFAKRGEAKSVTGIDMPRITLTPDEIAS
WQMTYATRDSPGTVIAFYRLARRAELHQVSVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSA
EAVLTLNGWREGVNGDWLVTRVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT

Sequences:

>Translated_229_residues
MAAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAGGRLIFAKRGEAKSVTGIDMPRITLTPDEIAS
WQMTYATRDSPGTVIAFYRLARRAELHQVSVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSA
EAVLTLNGWREGVNGDWLVTRVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT
>Mature_228_residues
AAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAGGRLIFAKRGEAKSVTGIDMPRITLTPDEIASW
QMTYATRDSPGTVIAFYRLARRAELHQVSVGDGHPVHRIKQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAE
AVLTLNGWREGVNGDWLVTRVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25167; Mature: 25036

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAGGRLIFAKRGEA
CCCCCCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
KSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRLARRAELHQVSVGDGHPVHRI
CCCCCCCCCEEEECHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHH
KQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGWREGVNGDWLVT
HHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEE
RVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT
EHHHCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AAEHGMTWAISPSLTGVALPHIDQTEESDINVLLRLAQRYDAIAKPAGGRLIFAKRGEA
CCCCCCEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
KSVTGIDMPRITLTPDEIASWQMTYATRDSPGTVIAFYRLARRAELHQVSVGDGHPVHRI
CCCCCCCCCEEEECHHHHHCEEEEEEECCCCCCCHHHHHHHHHHHHEEEECCCCCHHHHH
KQYLPDAAAAIAAARGELSRRARAETKLTLEMAGRAELSAEAVLTLNGWREGVNGDWLVT
HHHCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEE
RVQHGLDKNGYRCSIEAERPNNHPDVAAAINTQVRDQVVRPSRTHHQKT
EHHHCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA