Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is cdsA [H]
Identifier: 182680887
GI number: 182680887
Start: 422745
End: 423599
Strand: Reverse
Name: cdsA [H]
Synonym: XfasM23_0325
Alternate gene names: 182680887
Gene position: 423599-422745 (Counterclockwise)
Preceding gene: 182680888
Following gene: 182680886
Centisome position: 16.71
GC content: 53.22
Gene sequence:
>855_bases ATGACCCGAACCCGTGTCATTGCCGCGCTGGTCATGGCACCCGTCGCAATGTGTTCGATCCTGTTTTTACCAACGGCCTG GTTAGCCTCATTGACAGCAATCATCTTCCTATGGGGCTTATGGGAATGGATGAAGCTGTCCCAGGTAGAGGACACCTTGG TACGCACCGTGCTGCTGACACTGAACCTGCTTCTCATGGTGTTATTGGTTTGGGTTTCAGCTCACTCACTGGTGCTGTTT CAGATTGCCACGCTCATTGGTATCGCCTGGTGGATCCTAGCATTGTTATGGCTACGCTTCCTCGGATTTTGTGCCGACCC TAACCAACGCACCGCAAAGATAGTCAAAGTCACCGCAGGCACGTTAGCGGTGATTCCAGCGTGGTCTGCACTGGTCCTAC TCCACTCAGGTGATAAGCCTGGCTCAACATTTCCAGAGAGCTTACATGCCCACCTGTGGCTGCTAACGGCTCAGATAATG ATATGGGCCGCTGACTCCGGAGCGTATTTTTCTGGTCGCCTCTTTGGTAAACACAAACTGGCACCGCAGATCAGTCCCAA CAAAACTGTAGAAGGCCTCCTCGGCGGCATACTCACTGGATTGGCAGTAGCGGCTGGTTTTGGTCTATTGAATGGCGTAA CCATGGCCCAGTTCCCATCACTATTGCTCGTTTCATTCGTGGCAATCTTGGCTTCGGTGATCGGCGATTTGTTCGAAAGC CTGCTTAAGCGCCACGCCGGCATCAAAGATTCCGGCAGTATGATTCCAGGCCACGGTGGCGTTCTCGATCGTATCGATAG CACGCTCGCCGCACTCCCCGTGTTCGCACTGGGAAAAGACATCTTCGGTTTCTGA
Upstream 100 bases:
>100_bases CCGTATTGCAGCAAGCGTTGGACGACTACGCCAGCCGGGAGCGTCGCTTCGGTCTAACAAATGCACAAATCGCCAGCCGG GGGAAAGGAAGCATACCCGC
Downstream 100 bases:
>100_bases GCATGACTAAACCGATCCGCAACGTCGCCGTACTCGGTGCCACTGGCTCAATTGGGGCAGCAGCACTGGATGTGCTCGCA CGCCACCCCAGACAGTTCCA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MTRTRVIAALVMAPVAMCSILFLPTAWLASLTAIIFLWGLWEWMKLSQVEDTLVRTVLLTLNLLLMVLLVWVSAHSLVLF QIATLIGIAWWILALLWLRFLGFCADPNQRTAKIVKVTAGTLAVIPAWSALVLLHSGDKPGSTFPESLHAHLWLLTAQIM IWAADSGAYFSGRLFGKHKLAPQISPNKTVEGLLGGILTGLAVAAGFGLLNGVTMAQFPSLLLVSFVAILASVIGDLFES LLKRHAGIKDSGSMIPGHGGVLDRIDSTLAALPVFALGKDIFGF
Sequences:
>Translated_284_residues MTRTRVIAALVMAPVAMCSILFLPTAWLASLTAIIFLWGLWEWMKLSQVEDTLVRTVLLTLNLLLMVLLVWVSAHSLVLF QIATLIGIAWWILALLWLRFLGFCADPNQRTAKIVKVTAGTLAVIPAWSALVLLHSGDKPGSTFPESLHAHLWLLTAQIM IWAADSGAYFSGRLFGKHKLAPQISPNKTVEGLLGGILTGLAVAAGFGLLNGVTMAQFPSLLLVSFVAILASVIGDLFES LLKRHAGIKDSGSMIPGHGGVLDRIDSTLAALPVFALGKDIFGF >Mature_283_residues TRTRVIAALVMAPVAMCSILFLPTAWLASLTAIIFLWGLWEWMKLSQVEDTLVRTVLLTLNLLLMVLLVWVSAHSLVLFQ IATLIGIAWWILALLWLRFLGFCADPNQRTAKIVKVTAGTLAVIPAWSALVLLHSGDKPGSTFPESLHAHLWLLTAQIMI WAADSGAYFSGRLFGKHKLAPQISPNKTVEGLLGGILTGLAVAAGFGLLNGVTMAQFPSLLLVSFVAILASVIGDLFESL LKRHAGIKDSGSMIPGHGGVLDRIDSTLAALPVFALGKDIFGF
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=281, Percent_Identity=39.8576512455516, Blast_Score=175, Evalue=3e-45, Organism=Escherichia coli, GI1787677, Length=114, Percent_Identity=40.3508771929825, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 30576; Mature: 30445
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTRVIAALVMAPVAMCSILFLPTAWLASLTAIIFLWGLWEWMKLSQVEDTLVRTVLLT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLLLMVLLVWVSAHSLVLFQIATLIGIAWWILALLWLRFLGFCADPNQRTAKIVKVTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECC TLAVIPAWSALVLLHSGDKPGSTFPESLHAHLWLLTAQIMIWAADSGAYFSGRLFGKHKL HHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCEEECEECCCCCC APQISPNKTVEGLLGGILTGLAVAAGFGLLNGVTMAQFPSLLLVSFVAILASVIGDLFES CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKRHAGIKDSGSMIPGHGGVLDRIDSTLAALPVFALGKDIFGF HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRTRVIAALVMAPVAMCSILFLPTAWLASLTAIIFLWGLWEWMKLSQVEDTLVRTVLLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LNLLLMVLLVWVSAHSLVLFQIATLIGIAWWILALLWLRFLGFCADPNQRTAKIVKVTAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECC TLAVIPAWSALVLLHSGDKPGSTFPESLHAHLWLLTAQIMIWAADSGAYFSGRLFGKHKL HHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCEEECEECCCCCC APQISPNKTVEGLLGGILTGLAVAAGFGLLNGVTMAQFPSLLLVSFVAILASVIGDLFES CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKRHAGIKDSGSMIPGHGGVLDRIDSTLAALPVFALGKDIFGF HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]