Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is fabZ

Identifier: 182680882

GI number: 182680882

Start: 416060

End: 416542

Strand: Reverse

Name: fabZ

Synonym: XfasM23_0320

Alternate gene names: 182680882

Gene position: 416542-416060 (Counterclockwise)

Preceding gene: 182680883

Following gene: 182680881

Centisome position: 16.43

GC content: 49.28

Gene sequence:

>483_bases
ATGAGCGATTCACCCACTACCGCTCACACTCGTCTGGAATTACCAATCGATATCATTAGAATCCAAGCATTGCTGCCACA
CCGCTATCCCTTTCTATTGGTCGACCGAATACTGGAACTAGACCAGAAGCAAAAGCGTATCGTTGCTCAGAAAAATGTGT
CCATCAACGAACCATTCTTTCAAGGACATTTCCCTGAACATCCAGTCATGCCAGGCGTTCTTATCATTGAAGCACTTGCG
CAAGCCGGCGGCGTGATGACCCAACTAAACCTTAGCCATAATGGGCATTCCAGCCTCTTGTTTTATATGGTTAGAGTCGA
CAATGCCCGCTTCAACAAACAGGTGGTGCCCGGCGACATCCTGATCCTGGATATGACGATGAAACGACGGATCCGCAATA
TGGGCTGCTACTACGGCGAAGCGCGGGTTAACGGCGAAGTCGTCGCTTGCGCTGATATCATGTGTGCTGGTGTCAAGTCT
TAA

Upstream 100 bases:

>100_bases
CTCCATTGACCGACAATCGTACTTGGCGCAAAAACGCTGTACGGTTTAAACAGCTGGATATGCTGGTGCGCCGCATGATG
GCCGTCAGTAAGGAGAAAGC

Downstream 100 bases:

>100_bases
GCGCCCAGTATGGAAGCAGTGATGAATAAGCATGCGTCCTTGATCCACCCAACCGCAGTGATCGCTCCATCGGCCACGTT
AGCCCCAGACGTACAGATTG

Product: (3R)-hydroxymyristoyl-ACP dehydratase

Products: NA

Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSDSPTTAHTRLELPIDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALA
QAGGVMTQLNLSHNGHSSLLFYMVRVDNARFNKQVVPGDILILDMTMKRRIRNMGCYYGEARVNGEVVACADIMCAGVKS

Sequences:

>Translated_160_residues
MSDSPTTAHTRLELPIDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALA
QAGGVMTQLNLSHNGHSSLLFYMVRVDNARFNKQVVPGDILILDMTMKRRIRNMGCYYGEARVNGEVVACADIMCAGVKS
>Mature_159_residues
SDSPTTAHTRLELPIDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFFQGHFPEHPVMPGVLIIEALAQ
AGGVMTQLNLSHNGHSSLLFYMVRVDNARFNKQVVPGDILILDMTMKRRIRNMGCYYGEARVNGEVVACADIMCAGVKS

Specific function: Involved in saturated fatty acids biosynthesis

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioester dehydratase family. FabZ subfamily

Homologues:

Organism=Escherichia coli, GI1786377, Length=151, Percent_Identity=45.6953642384106, Blast_Score=134, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FABZ_XYLF2 (B2I7P0)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001829042.1
- ProteinModelPortal:   B2I7P0
- GeneID:   6201875
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_0320
- HOGENOM:   HBG433282
- OMA:   KERRGVA
- ProtClustDB:   PRK00006
- GO:   GO:0005737
- HAMAP:   MF_00406
- InterPro:   IPR013114
- InterPro:   IPR010084
- TIGRFAMs:   TIGR01750

Pfam domain/function: PF07977 FabA

EC number: 4.2.1.-

Molecular weight: Translated: 17996; Mature: 17865

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: ACT_SITE 63-63

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSPTTAHTRLELPIDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFF
CCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
QGHFPEHPVMPGVLIIEALAQAGGVMTQLNLSHNGHSSLLFYMVRVDNARFNKQVVPGDI
CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEEECCCCCCCEECCCCE
LILDMTMKRRIRNMGCYYGEARVNGEVVACADIMCAGVKS
EEEEHHHHHHHHHCCCEECCEECCCCEEEEHHHHHCCCCC
>Mature Secondary Structure 
SDSPTTAHTRLELPIDIIRIQALLPHRYPFLLVDRILELDQKQKRIVAQKNVSINEPFF
CCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCC
QGHFPEHPVMPGVLIIEALAQAGGVMTQLNLSHNGHSSLLFYMVRVDNARFNKQVVPGDI
CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEEECCCCCCCEECCCCE
LILDMTMKRRIRNMGCYYGEARVNGEVVACADIMCAGVKS
EEEEHHHHHHHHHCCCEECCEECCCCEEEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA