Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182680858

Identifier: 182680858

GI number: 182680858

Start: 378785

End: 379231

Strand: Direct

Name: 182680858

Synonym: XfasM23_0295

Alternate gene names: NA

Gene position: 378785-379231 (Clockwise)

Preceding gene: 182680857

Following gene: 182680859

Centisome position: 14.94

GC content: 46.31

Gene sequence:

>447_bases
ATGTCATTGACTGTAGAACAAGCCAACGCATTACTGGGCAGCATCACCACCAGGGAGCAGTTGCGGGATTTAATTAATCA
ACTTGATATTCATAGCAGCGGCAGTATCACGGTTTTATATAGCGGTTATACGGCCAATGGACTCGATAACTCTCAGATTA
TTCAGGGGATGCTGCATAACGGGGATACTATCCGGGTGATTGATACAACTGAGGCCGCCAAGTTTCTGAATATAGAGCCG
GGTGATCCCAACAGAAATGAGGCGCTGCTGCGCAGTCATTATTATGTGGAGGTTCTGCTGCATGGCGATGATGTGTATTC
AACTGCAAACCGCAGTGTCATATGTTTGATAAAGCACCATGATCGGGTGTTTTATCAAGGGTGTGACACCGCCACACCAT
CACAAGGGAGGGGGCATGCAGTAAGCAGTGTTTTATTTACTCAATAA

Upstream 100 bases:

>100_bases
TGAAAGAGGCATTAACTGTGCATGGCGCGGGAGATTCTAATCGTCGCATTCACCATCCCATTGTGGTCCATTTTGGATTT
TAAATCAGAGGAAGATAAAC

Downstream 100 bases:

>100_bases
CATCATCTATGTATTTCACACCTTAAAGGAGCGTCTATGCCGTTTATCAATGAAATTCCCACCGCAGAAGATATCGAAAA
ATATGGCATGTTACCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MSLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHNGDTIRVIDTTEAAKFLNIEP
GDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHHDRVFYQGCDTATPSQGRGHAVSSVLFTQ

Sequences:

>Translated_148_residues
MSLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHNGDTIRVIDTTEAAKFLNIEP
GDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHHDRVFYQGCDTATPSQGRGHAVSSVLFTQ
>Mature_147_residues
SLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHNGDTIRVIDTTEAAKFLNIEPG
DPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHHDRVFYQGCDTATPSQGRGHAVSSVLFTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16301; Mature: 16170

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHN
CCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCC
GDTIRVIDTTEAAKFLNIEPGDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHH
CCEEEEEECCCCEEEEECCCCCCCCCHHHEECEEEEEEEEECCCEECCCCCEEEEEEECC
DRVFYQGCDTATPSQGRGHAVSSVLFTQ
CEEEEECCCCCCCCCCCCCEEHEEEECC
>Mature Secondary Structure 
SLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHN
CEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCC
GDTIRVIDTTEAAKFLNIEPGDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHH
CCEEEEEECCCCEEEEECCCCCCCCCHHHEECEEEEEEEEECCCEECCCCCEEEEEEECC
DRVFYQGCDTATPSQGRGHAVSSVLFTQ
CEEEEECCCCCCCCCCCCCEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA