Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680858
Identifier: 182680858
GI number: 182680858
Start: 378785
End: 379231
Strand: Direct
Name: 182680858
Synonym: XfasM23_0295
Alternate gene names: NA
Gene position: 378785-379231 (Clockwise)
Preceding gene: 182680857
Following gene: 182680859
Centisome position: 14.94
GC content: 46.31
Gene sequence:
>447_bases ATGTCATTGACTGTAGAACAAGCCAACGCATTACTGGGCAGCATCACCACCAGGGAGCAGTTGCGGGATTTAATTAATCA ACTTGATATTCATAGCAGCGGCAGTATCACGGTTTTATATAGCGGTTATACGGCCAATGGACTCGATAACTCTCAGATTA TTCAGGGGATGCTGCATAACGGGGATACTATCCGGGTGATTGATACAACTGAGGCCGCCAAGTTTCTGAATATAGAGCCG GGTGATCCCAACAGAAATGAGGCGCTGCTGCGCAGTCATTATTATGTGGAGGTTCTGCTGCATGGCGATGATGTGTATTC AACTGCAAACCGCAGTGTCATATGTTTGATAAAGCACCATGATCGGGTGTTTTATCAAGGGTGTGACACCGCCACACCAT CACAAGGGAGGGGGCATGCAGTAAGCAGTGTTTTATTTACTCAATAA
Upstream 100 bases:
>100_bases TGAAAGAGGCATTAACTGTGCATGGCGCGGGAGATTCTAATCGTCGCATTCACCATCCCATTGTGGTCCATTTTGGATTT TAAATCAGAGGAAGATAAAC
Downstream 100 bases:
>100_bases CATCATCTATGTATTTCACACCTTAAAGGAGCGTCTATGCCGTTTATCAATGAAATTCCCACCGCAGAAGATATCGAAAA ATATGGCATGTTACCTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHNGDTIRVIDTTEAAKFLNIEP GDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHHDRVFYQGCDTATPSQGRGHAVSSVLFTQ
Sequences:
>Translated_148_residues MSLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHNGDTIRVIDTTEAAKFLNIEP GDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHHDRVFYQGCDTATPSQGRGHAVSSVLFTQ >Mature_147_residues SLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHNGDTIRVIDTTEAAKFLNIEPG DPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHHDRVFYQGCDTATPSQGRGHAVSSVLFTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16301; Mature: 16170
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHN CCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCC GDTIRVIDTTEAAKFLNIEPGDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHH CCEEEEEECCCCEEEEECCCCCCCCCHHHEECEEEEEEEEECCCEECCCCCEEEEEEECC DRVFYQGCDTATPSQGRGHAVSSVLFTQ CEEEEECCCCCCCCCCCCCEEHEEEECC >Mature Secondary Structure SLTVEQANALLGSITTREQLRDLINQLDIHSSGSITVLYSGYTANGLDNSQIIQGMLHN CEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCC GDTIRVIDTTEAAKFLNIEPGDPNRNEALLRSHYYVEVLLHGDDVYSTANRSVICLIKHH CCEEEEEECCCCEEEEECCCCCCCCCHHHEECEEEEEEEEECCCEECCCCCEEEEEEECC DRVFYQGCDTATPSQGRGHAVSSVLFTQ CEEEEECCCCCCCCCCCCCEEHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA