Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680857
Identifier: 182680857
GI number: 182680857
Start: 378261
End: 378767
Strand: Direct
Name: 182680857
Synonym: XfasM23_0294
Alternate gene names: NA
Gene position: 378261-378767 (Clockwise)
Preceding gene: 182680856
Following gene: 182680858
Centisome position: 14.92
GC content: 43.98
Gene sequence:
>507_bases ATGCCGTTTATTAATGAAATCCCCAGTGCCGAAGATATCGAAAAATATGGGTTGCCTTATAAAAAGCAACTAAATTTGGA TATCAGTCTACGTAGTCAATGGACGGTGGATCGTGAACGCAACTTCCATTTATACGGGGGGGGCACTGCAAATCAGGCTT ATGAAGAGATTTTTTATTACCGTTTTTATATGTATTTAAATGGGACGAAGTTTGTTGTTGAATTAGATGTAGACCGTAAT CGTATACCCTCCATGTTTAAGGACAACCCCTATGTAGTTGAGTGGAGCAAACTGATGTCGATCAAGGTATGGCCCCATGA TCAGGTGAGTCCCTTGAAGAGAGTACCGCCCGCGGCCTGGGACACCCCAGATGCGCCGCAACCACTCTTGGACAATCGCT CACTCAATCAATTTATTGCCATTCTGAAAGAGGCATTAACTGTGCATGGCGCGGGAGATTCTAATCGTCGCATTCACCAT CCCATTGTGGTCCATTTTGGATTTTAA
Upstream 100 bases:
>100_bases GACACCGCCACACCATCACAAGGGAGGAGCGCACGCAGTAAGCAGTGTTTTATTGACTCAATAACATCATCTATGTATTT CACACCTTAAAGGACCGTCT
Downstream 100 bases:
>100_bases ATCAGAGGAAGATAAACATGTCATTGACTGTAGAACAAGCCAACGCATTACTGGGCAGCATCACCACCAGGGAGCAGTTG CGGGATTTAATTAATCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPFINEIPSAEDIEKYGLPYKKQLNLDISLRSQWTVDRERNFHLYGGGTANQAYEEIFYYRFYMYLNGTKFVVELDVDRN RIPSMFKDNPYVVEWSKLMSIKVWPHDQVSPLKRVPPAAWDTPDAPQPLLDNRSLNQFIAILKEALTVHGAGDSNRRIHH PIVVHFGF
Sequences:
>Translated_168_residues MPFINEIPSAEDIEKYGLPYKKQLNLDISLRSQWTVDRERNFHLYGGGTANQAYEEIFYYRFYMYLNGTKFVVELDVDRN RIPSMFKDNPYVVEWSKLMSIKVWPHDQVSPLKRVPPAAWDTPDAPQPLLDNRSLNQFIAILKEALTVHGAGDSNRRIHH PIVVHFGF >Mature_167_residues PFINEIPSAEDIEKYGLPYKKQLNLDISLRSQWTVDRERNFHLYGGGTANQAYEEIFYYRFYMYLNGTKFVVELDVDRNR IPSMFKDNPYVVEWSKLMSIKVWPHDQVSPLKRVPPAAWDTPDAPQPLLDNRSLNQFIAILKEALTVHGAGDSNRRIHHP IVVHFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19624; Mature: 19492
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFINEIPSAEDIEKYGLPYKKQLNLDISLRSQWTVDRERNFHLYGGGTANQAYEEIFYY CCCCCCCCCCCHHHHHCCCCHHEECEEEEECCEEEECCCCCEEEEECCCCHHHHHHHHHE RFYMYLNGTKFVVELDVDRNRIPSMFKDNPYVVEWSKLMSIKVWPHDQVSPLKRVPPAAW EEEEEECCCEEEEEEECCCCCCCHHHCCCCEEEEEEEEEEEEECCCCCCCHHHHCCCCCC DTPDAPQPLLDNRSLNQFIAILKEALTVHGAGDSNRRIHHPIVVHFGF CCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEECCEEEEECC >Mature Secondary Structure PFINEIPSAEDIEKYGLPYKKQLNLDISLRSQWTVDRERNFHLYGGGTANQAYEEIFYY CCCCCCCCCCHHHHHCCCCHHEECEEEEECCEEEECCCCCEEEEECCCCHHHHHHHHHE RFYMYLNGTKFVVELDVDRNRIPSMFKDNPYVVEWSKLMSIKVWPHDQVSPLKRVPPAAW EEEEEECCCEEEEEEECCCCCCCHHHCCCCEEEEEEEEEEEEECCCCCCCHHHHCCCCCC DTPDAPQPLLDNRSLNQFIAILKEALTVHGAGDSNRRIHHPIVVHFGF CCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA