Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680859
Identifier: 182680859
GI number: 182680859
Start: 379383
End: 379778
Strand: Direct
Name: 182680859
Synonym: XfasM23_0296
Alternate gene names: NA
Gene position: 379383-379778 (Clockwise)
Preceding gene: 182680858
Following gene: 182680860
Centisome position: 14.96
GC content: 46.21
Gene sequence:
>396_bases GTGAACGCAACTTCCATTTATACGGGGGGGGCCACTGCAAATCAGGCTTATGAAGAGATTTTTTATTACCGTTTTTATCT GTATTTGAATGGGACGAAGTTTGTTGTTGAATTAGATGTGGACCGTAATCGTAAACCCTCAATGTTTAAGGATAATCCTT TTGTTGTTGAGTGGAGCAAACTGATGTCGATCAAGGTATGGCCCCATGATCAGGTGAGTCCCTTGAAGAGAGTACCGCCC ACGGCCTGGGACACCCCCGATGCACCGCAACCGCTCCTGGACAATTATTCACTCAATGAATTCATTGCCATCCTGAAAGA AGCCGTGACTGTGCATGGCGCGGGAGATTCTAACCGTCACATTCACCATCCCATTGTGGTCCGTTTTGGATTTTAA
Upstream 100 bases:
>100_bases GAAATTCCCACCGCAGAAGATATCGAAAAATATGGCATGTTACCTTATAAAAATGATTTGAATTTGGATATCAGTCTGCG TAGTCAATGGACGGTGGATC
Downstream 100 bases:
>100_bases ATCAGAGGAAGATAAACATGTCATTGACTGCAGAACAAGCCAACGCATTACTGGGCAGTATTACCACCCAGGAGCAGTTG CGGGATTTAATTAATCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MNATSIYTGGATANQAYEEIFYYRFYLYLNGTKFVVELDVDRNRKPSMFKDNPFVVEWSKLMSIKVWPHDQVSPLKRVPP TAWDTPDAPQPLLDNYSLNEFIAILKEAVTVHGAGDSNRHIHHPIVVRFGF
Sequences:
>Translated_131_residues MNATSIYTGGATANQAYEEIFYYRFYLYLNGTKFVVELDVDRNRKPSMFKDNPFVVEWSKLMSIKVWPHDQVSPLKRVPP TAWDTPDAPQPLLDNYSLNEFIAILKEAVTVHGAGDSNRHIHHPIVVRFGF >Mature_131_residues MNATSIYTGGATANQAYEEIFYYRFYLYLNGTKFVVELDVDRNRKPSMFKDNPFVVEWSKLMSIKVWPHDQVSPLKRVPP TAWDTPDAPQPLLDNYSLNEFIAILKEAVTVHGAGDSNRHIHHPIVVRFGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15073; Mature: 15073
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATSIYTGGATANQAYEEIFYYRFYLYLNGTKFVVELDVDRNRKPSMFKDNPFVVEWSK CCCCEEEECCCCCHHHHHHHHEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECC LMSIKVWPHDQVSPLKRVPPTAWDTPDAPQPLLDNYSLNEFIAILKEAVTVHGAGDSNRH EEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCE IHHPIVVRFGF ECCCEEEEECC >Mature Secondary Structure MNATSIYTGGATANQAYEEIFYYRFYLYLNGTKFVVELDVDRNRKPSMFKDNPFVVEWSK CCCCEEEECCCCCHHHHHHHHEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECC LMSIKVWPHDQVSPLKRVPPTAWDTPDAPQPLLDNYSLNEFIAILKEAVTVHGAGDSNRH EEEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCE IHHPIVVRFGF ECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA