Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680802
Identifier: 182680802
GI number: 182680802
Start: 314827
End: 315150
Strand: Direct
Name: 182680802
Synonym: XfasM23_0236
Alternate gene names: NA
Gene position: 314827-315150 (Clockwise)
Preceding gene: 182680798
Following gene: 182680803
Centisome position: 12.42
GC content: 55.86
Gene sequence:
>324_bases ATGGCGATTGTGGTGAGTATTGCTGTGATTCACTTGATGGTTGCTGTGGTGTGGTGGCGTACCCAGGGGGTTATTTTGGT GCAGCGCGTGACGGCAATATCGTCACGTTCTAGTGCAGCAACGCCGCTGCTGCAAGGGACGGGCTATGTGATCGCGAGAC GGCAAGCGACGGTTTCGGCGCAGGTCAGCGGCGTTTTGGTTCAGTTATTCATTGAAGAGGGTGACACGGTCAAGGCCGGG CAAGTGATTGCGCGTTTTGATGATAGTGCGCTGCGTACTGAATTCAACACAGCTGTGGTCAGTGTCGAAGCAGCCGCGGC GTAG
Upstream 100 bases:
>100_bases ATTAAATAAATTCTCTGCCATGAATCATTCGAAGTTATTGAATGAATGACGTATAGAGCAAGATCAGCGGGCCAATGATT GTCGCGGTAAGGGGCGTTGG
Downstream 100 bases:
>100_bases GTGGGGCAGTTCCAGGCGTAATTGGTGCAGGCTGAGGCTGAGGCGCGCCGCGCCAGCGAGTTGTCCAGTGTCGGTGTGCT CAGTAAGTAGGCAGCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MAIVVSIAVIHLMVAVVWWRTQGVILVQRVTAISSRSSAATPLLQGTGYVIARRQATVSAQVSGVLVQLFIEEGDTVKAG QVIARFDDSALRTEFNTAVVSVEAAAA
Sequences:
>Translated_107_residues MAIVVSIAVIHLMVAVVWWRTQGVILVQRVTAISSRSSAATPLLQGTGYVIARRQATVSAQVSGVLVQLFIEEGDTVKAG QVIARFDDSALRTEFNTAVVSVEAAAA >Mature_106_residues AIVVSIAVIHLMVAVVWWRTQGVILVQRVTAISSRSSAATPLLQGTGYVIARRQATVSAQVSGVLVQLFIEEGDTVKAGQ VIARFDDSALRTEFNTAVVSVEAAAA
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11310; Mature: 11179
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIVVSIAVIHLMVAVVWWRTQGVILVQRVTAISSRSSAATPLLQGTGYVIARRQATVSA CEEEHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCEECCCCEEEEECCCEEHH QVSGVLVQLFIEEGDTVKAGQVIARFDDSALRTEFNTAVVSVEAAAA HHHHEEEEEEECCCCCCCCCEEEEECCCCHHHEECCEEEEEEEECCC >Mature Secondary Structure AIVVSIAVIHLMVAVVWWRTQGVILVQRVTAISSRSSAATPLLQGTGYVIARRQATVSA EEEHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCEECCCCEEEEECCCEEHH QVSGVLVQLFIEEGDTVKAGQVIARFDDSALRTEFNTAVVSVEAAAA HHHHEEEEEEECCCCCCCCCEEEEECCCCHHHEECCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA