Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is folK [H]
Identifier: 182680743
GI number: 182680743
Start: 236138
End: 236635
Strand: Direct
Name: folK [H]
Synonym: XfasM23_0172
Alternate gene names: 182680743
Gene position: 236138-236635 (Clockwise)
Preceding gene: 182680742
Following gene: 182680744
Centisome position: 9.31
GC content: 54.62
Gene sequence:
>498_bases GTGACCAGTGGCAATGTGGTGGCTTATGTTGGGTTGGGCGCCAATCTCGGCCCGGCTGAGATGACGTTGCGAGCCGCAAT TGCTGCGTTGGATCAGTTGCCGTTCACCCGTCTACGCATTGCTTCCAGTTTGTATCGCACCCCTCCCTGGGGACGTCAGG ATCAGGCGGAGTTTGTTAATGCGGTTGCAGCGTTGGAAACAAGGTTAGCGCCTTTAGCCTTGTTGGATGCATTGTTGGAG GTGGAATGTCTCCATGGGAGAGTGCGTCTTCCCGGCGACCGTTGGGGGCCGCGTACACTTGATCTGGATTTGTTGCTTTA TGGGGAGCATGTTTTGGATCTGCCGCGACTGAGGGTGCCTCATCCTCATCTACATGAGCGCACTTTTGTAGTGGTGCCTT TGGCCGAAATTGCTGCGGAGTTGGTGCTTCCTCGTCATGGGATGGTATGTGAGCTATTGGAGCATATGGATACCTTGGGC TTGGTACCAATCAGGTAG
Upstream 100 bases:
>100_bases CTTCTGAAGACTCTCTGGCGTCAGCCATTGATGCTGTGCGGTTTGAATCGGAGGAAGTGGGTGTGTCGCGTCAGCGGTAA TGCCAAGGTGGTCAAGTAGA
Downstream 100 bases:
>100_bases ATAATGTTCACTGGTTAGATTTTCATGAATTTATGAGCATATATACCAATAGCAAACCTTGGACGGTGCCTGCTTTGGCG GAGGCCAAGCGAAACGGTTC
Product: 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase
Products: NA
Alternate protein names: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase; PPPK; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; HPPK [H]
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTSGNVVAYVGLGANLGPAEMTLRAAIAALDQLPFTRLRIASSLYRTPPWGRQDQAEFVNAVAALETRLAPLALLDALLE VECLHGRVRLPGDRWGPRTLDLDLLLYGEHVLDLPRLRVPHPHLHERTFVVVPLAEIAAELVLPRHGMVCELLEHMDTLG LVPIR
Sequences:
>Translated_165_residues MTSGNVVAYVGLGANLGPAEMTLRAAIAALDQLPFTRLRIASSLYRTPPWGRQDQAEFVNAVAALETRLAPLALLDALLE VECLHGRVRLPGDRWGPRTLDLDLLLYGEHVLDLPRLRVPHPHLHERTFVVVPLAEIAAELVLPRHGMVCELLEHMDTLG LVPIR >Mature_164_residues TSGNVVAYVGLGANLGPAEMTLRAAIAALDQLPFTRLRIASSLYRTPPWGRQDQAEFVNAVAALETRLAPLALLDALLEV ECLHGRVRLPGDRWGPRTLDLDLLLYGEHVLDLPRLRVPHPHLHERTFVVVPLAEIAAELVLPRHGMVCELLEHMDTLGL VPIR
Specific function: Dihydrofolate biosynthesis; first step. [C]
COG id: COG0801
COG function: function code H; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HPPK family [H]
Homologues:
Organism=Escherichia coli, GI1786335, Length=148, Percent_Identity=46.6216216216216, Blast_Score=132, Evalue=9e-33, Organism=Saccharomyces cerevisiae, GI6324073, Length=158, Percent_Identity=31.6455696202532, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000550 [H]
Pfam domain/function: PF01288 HPPK [H]
EC number: =2.7.6.3 [H]
Molecular weight: Translated: 18224; Mature: 18092
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00794 HPPK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGNVVAYVGLGANLGPAEMTLRAAIAALDQLPFTRLRIASSLYRTPPWGRQDQAEFVN CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHH AVAALETRLAPLALLDALLEVECLHGRVRLPGDRWGPRTLDLDLLLYGEHVLDLPRLRVP HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEEEEECCHHHCCCCCCCC HPHLHERTFVVVPLAEIAAELVLPRHGMVCELLEHMDTLGLVPIR CCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSGNVVAYVGLGANLGPAEMTLRAAIAALDQLPFTRLRIASSLYRTPPWGRQDQAEFVN CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHH AVAALETRLAPLALLDALLEVECLHGRVRLPGDRWGPRTLDLDLLLYGEHVLDLPRLRVP HHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEEEEEEECCHHHCCCCCCCC HPHLHERTFVVVPLAEIAAELVLPRHGMVCELLEHMDTLGLVPIR CCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10080886 [H]