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The map label for this gene is yajC

Identifier: 182680739

GI number: 182680739

Start: 231264

End: 231626

Strand: Direct

Name: yajC

Synonym: XfasM23_0168

Alternate gene names: 182680739

Gene position: 231264-231626 (Clockwise)

Preceding gene: 182680738

Following gene: 182680740

Centisome position: 9.12

GC content: 50.14

Gene sequence:

>363_bases
ATGGAAATAACTATGAACTTGTTTGATTTCTTCATTCCTGTTGCTCAGGCGCAGAGCGCGGCTCCGGCCGGGGCTTCACC
AGGTGGCGGTTTGCAAATGTTTTTCTTGCCGGTCATTCTGATTGCGGTCATGTACTTTTCTATCATTCGTCCGCAGATGA
AACGTCAGAAAGAGTACAAGACCATGATGGATCATCTTGGGTGTGGCGATGAAGTGATCACTGCTGGCGGCATTGCCGGT
GTGGTGTCAGTGATTGGGGATGAGTTTGTTACTGTAGAGATTGCGGAAAATGTGCGCGTGCGCGTACAAAAAAGCGCCAT
TGCTAAGGCGTTGCCCAAAGGCTCGTTGCCGTCGGCAAAATGA

Upstream 100 bases:

>100_bases
ATGTCGGCTCTCATGGCATAATTGTCGGCTTACTACCGCTTCGGCGGATGCATAAAGTTGGGCATGTCTCCGTGTCCTGT
CCATGAAATGATGATTAGAG

Downstream 100 bases:

>100_bases
TGTCTATCTCCTTTGTGATTTTCCTAGGGTGCGATGCTGTAGCTGGTGTCGCCCGAGACTTGCGCAATGCTTGAATTACC
CCGTTGGAAATATGTTCTTA

Product: preprotein translocase subunit YajC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MEITMNLFDFFIPVAQAQSAAPAGASPGGGLQMFFLPVILIAVMYFSIIRPQMKRQKEYKTMMDHLGCGDEVITAGGIAG
VVSVIGDEFVTVEIAENVRVRVQKSAIAKALPKGSLPSAK

Sequences:

>Translated_120_residues
MEITMNLFDFFIPVAQAQSAAPAGASPGGGLQMFFLPVILIAVMYFSIIRPQMKRQKEYKTMMDHLGCGDEVITAGGIAG
VVSVIGDEFVTVEIAENVRVRVQKSAIAKALPKGSLPSAK
>Mature_120_residues
MEITMNLFDFFIPVAQAQSAAPAGASPGGGLQMFFLPVILIAVMYFSIIRPQMKRQKEYKTMMDHLGCGDEVITAGGIAG
VVSVIGDEFVTVEIAENVRVRVQKSAIAKALPKGSLPSAK

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=110, Percent_Identity=35.4545454545455, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12830; Mature: 12830

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITMNLFDFFIPVAQAQSAAPAGASPGGGLQMFFLPVILIAVMYFSIIRPQMKRQKEYK
CEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMMDHLGCGDEVITAGGIAGVVSVIGDEFVTVEIAENVRVRVQKSAIAKALPKGSLPSAK
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEITMNLFDFFIPVAQAQSAAPAGASPGGGLQMFFLPVILIAVMYFSIIRPQMKRQKEYK
CEEHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMMDHLGCGDEVITAGGIAGVVSVIGDEFVTVEIAENVRVRVQKSAIAKALPKGSLPSAK
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]