Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is djlA [C]
Identifier: 182680726
GI number: 182680726
Start: 214229
End: 214597
Strand: Direct
Name: djlA [C]
Synonym: XfasM23_0155
Alternate gene names: 182680726
Gene position: 214229-214597 (Clockwise)
Preceding gene: 182680722
Following gene: 182680727
Centisome position: 8.45
GC content: 53.66
Gene sequence:
>369_bases ATGTCTCCCCTTAATTCCCTTGTTGGCTCGCCATTTGTGATGCACTGGTACGGAAAATTGTTTGGTTTCATTATTGGTGC ACTGTTGTTTCGACCCAATCCGGTATTTGGTGTGTTGATCGGTGTGTTGATCGGTCACGCGGTGGATAAGCGGCGCTTGA GGCATCCAGAGGATGATCCATACCGCGTGATGGGATTGGGCGCGGGGGCTACGAATGCCGAGATCGAGTTGGCGTATCGT CGGCTGATGTCTAGGTACCATCCCGATAAGTTGGCGCAGGCTTCACCGCAGTTGCGTGAGCAAGCTGAGCAGAAGGTGCG CCAGATCAATGCTGCGTATGATCGTATTCAGCGTCGCTGTCGGCGTTGA
Upstream 100 bases:
>100_bases TTTGTAGTTTTTACATTTAATTGGCTAACTATTTTTTAGGTGAGATTTTATTCATGATCTTTCTTAATTAATGCGTGAGT TTTGATGCGGCTTGGCTAGA
Downstream 100 bases:
>100_bases TCTTGGCTCAGGTATCGGGTCATTCACTTTCCTCAGAGCGTTTCATGTCCAATTGTCTGATTGCTCCATCCATTCTTTCC GCTGACTTTGCCCGTCTTGG
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSPLNSLVGSPFVMHWYGKLFGFIIGALLFRPNPVFGVLIGVLIGHAVDKRRLRHPEDDPYRVMGLGAGATNAEIELAYR RLMSRYHPDKLAQASPQLREQAEQKVRQINAAYDRIQRRCRR
Sequences:
>Translated_122_residues MSPLNSLVGSPFVMHWYGKLFGFIIGALLFRPNPVFGVLIGVLIGHAVDKRRLRHPEDDPYRVMGLGAGATNAEIELAYR RLMSRYHPDKLAQASPQLREQAEQKVRQINAAYDRIQRRCRR >Mature_121_residues SPLNSLVGSPFVMHWYGKLFGFIIGALLFRPNPVFGVLIGVLIGHAVDKRRLRHPEDDPYRVMGLGAGATNAEIELAYRR LMSRYHPDKLAQASPQLREQAEQKVRQINAAYDRIQRRCRR
Specific function: Regulatory Dnak Co-Chaperone. Direct Interaction Between Dnak And Djla Is Needed For The Induction Of The Wcaabcde Operon, Involved In The Synthesis Of A Colanic Acid Polysaccharide Capsule, Possibly Through Activation Of The Rcsb/Rcsc Phosphotransfer Sig
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Type III Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13957; Mature: 13825
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLNSLVGSPFVMHWYGKLFGFIIGALLFRPNPVFGVLIGVLIGHAVDKRRLRHPEDDP CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC YRVMGLGAGATNAEIELAYRRLMSRYHPDKLAQASPQLREQAEQKVRQINAAYDRIQRRC EEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RR CC >Mature Secondary Structure SPLNSLVGSPFVMHWYGKLFGFIIGALLFRPNPVFGVLIGVLIGHAVDKRRLRHPEDDP CHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC YRVMGLGAGATNAEIELAYRRLMSRYHPDKLAQASPQLREQAEQKVRQINAAYDRIQRRC EEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA