Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680679
Identifier: 182680679
GI number: 182680679
Start: 146846
End: 147592
Strand: Reverse
Name: 182680679
Synonym: XfasM23_0108
Alternate gene names: NA
Gene position: 147592-146846 (Counterclockwise)
Preceding gene: 182680680
Following gene: 182680678
Centisome position: 5.82
GC content: 54.22
Gene sequence:
>747_bases ATGGCAACACCGCGCGCTAGAAACCAAGCACGGCGCAACACTAATAATGCCCCTCCAGGATGGGTATGGCTGATTGCCGG TGCGGCGATCACTGCAATCGTATTTCTGGCAGCGCCAAAATTATTCAAGAAAAATGACGGCAGCCTTTTGCACATCGATG CGAATTCCAACCCAAACGCGCAACCGGCGCCCGTGGCCGACCACAACACCCCTATTGCGCAGCCATCCAAGCCAACCACC AAGGACAAACCAACCCCAAAACAACAGGAATACGACTTCTACACCCTGCTACCTGGCAAGGAAGTACCTACATCCAACGG TGACCGAATAGAGAAAGCAAACACCGTGCCCAGCAACACACCGCCCAAGATAACCAGTACACCAGTACAAACCACCACCA ACGATCCCAAACCTTTACCGGAACCGCTCTCCCCTAGCCCAGCACCGATACCCGTCACCCCAAAAAAACCAACCCCAGCC CCTACAAGCCCACCTCCGGCAGTGATCGCGGACACCACCCGCTACATTTTGCAGGCTGGCTCATTCGGCACCTCCAATGA AGCGGAATCGACCAAAGCCCGGCTTGCCATGCTCGGCTTGAGTGCGCGCATCGAATCAACCAACATCGGAGGCAAACAAC TGTACCGCGTGCGTATGGGACCATATAGCAACGCCAACGAACTGGCAGAAGCCAGAAAAAAAATCGATAGTAACGGCTTG CAAGCCATCACCATCAAAACCCATTAA
Upstream 100 bases:
>100_bases CAGGCAAGTCCTCGCCAACGGCCTGAACCTACTCGGCGTCGGCACCCCGGAAAAGATGTGAATCAAACACACCGCTATGA AGAAGTAATTGGAGAAGTTG
Downstream 100 bases:
>100_bases TCACAGGACCTTCTGCACCAAAACTCCCAACACCGTGGCCACATGCAGCAATCGTTTTCACTCCCACCAACCATGCACAG CGTCGTCGATACAACCATCT
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MATPRARNQARRNTNNAPPGWVWLIAGAAITAIVFLAAPKLFKKNDGSLLHIDANSNPNAQPAPVADHNTPIAQPSKPTT KDKPTPKQQEYDFYTLLPGKEVPTSNGDRIEKANTVPSNTPPKITSTPVQTTTNDPKPLPEPLSPSPAPIPVTPKKPTPA PTSPPPAVIADTTRYILQAGSFGTSNEAESTKARLAMLGLSARIESTNIGGKQLYRVRMGPYSNANELAEARKKIDSNGL QAITIKTH
Sequences:
>Translated_248_residues MATPRARNQARRNTNNAPPGWVWLIAGAAITAIVFLAAPKLFKKNDGSLLHIDANSNPNAQPAPVADHNTPIAQPSKPTT KDKPTPKQQEYDFYTLLPGKEVPTSNGDRIEKANTVPSNTPPKITSTPVQTTTNDPKPLPEPLSPSPAPIPVTPKKPTPA PTSPPPAVIADTTRYILQAGSFGTSNEAESTKARLAMLGLSARIESTNIGGKQLYRVRMGPYSNANELAEARKKIDSNGL QAITIKTH >Mature_247_residues ATPRARNQARRNTNNAPPGWVWLIAGAAITAIVFLAAPKLFKKNDGSLLHIDANSNPNAQPAPVADHNTPIAQPSKPTTK DKPTPKQQEYDFYTLLPGKEVPTSNGDRIEKANTVPSNTPPKITSTPVQTTTNDPKPLPEPLSPSPAPIPVTPKKPTPAP TSPPPAVIADTTRYILQAGSFGTSNEAESTKARLAMLGLSARIESTNIGGKQLYRVRMGPYSNANELAEARKKIDSNGLQ AITIKTH
Specific function: Unknown
COG id: COG3087
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26500; Mature: 26369
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPRARNQARRNTNNAPPGWVWLIAGAAITAIVFLAAPKLFKKNDGSLLHIDANSNPNA CCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCC QPAPVADHNTPIAQPSKPTTKDKPTPKQQEYDFYTLLPGKEVPTSNGDRIEKANTVPSNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCC PPKITSTPVQTTTNDPKPLPEPLSPSPAPIPVTPKKPTPAPTSPPPAVIADTTRYILQAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCC SFGTSNEAESTKARLAMLGLSARIESTNIGGKQLYRVRMGPYSNANELAEARKKIDSNGL CCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCC QAITIKTH EEEEEECC >Mature Secondary Structure ATPRARNQARRNTNNAPPGWVWLIAGAAITAIVFLAAPKLFKKNDGSLLHIDANSNPNA CCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCC QPAPVADHNTPIAQPSKPTTKDKPTPKQQEYDFYTLLPGKEVPTSNGDRIEKANTVPSNT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEECCCCCCCCC PPKITSTPVQTTTNDPKPLPEPLSPSPAPIPVTPKKPTPAPTSPPPAVIADTTRYILQAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCC SFGTSNEAESTKARLAMLGLSARIESTNIGGKQLYRVRMGPYSNANELAEARKKIDSNGL CCCCCCCHHHHHHHHHHHHHHHEEECCCCCHHEEEEEECCCCCCHHHHHHHHHHHCCCCC QAITIKTH EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA