Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182680668
Identifier: 182680668
GI number: 182680668
Start: 134246
End: 134677
Strand: Reverse
Name: 182680668
Synonym: XfasM23_0097
Alternate gene names: NA
Gene position: 134677-134246 (Counterclockwise)
Preceding gene: 182680669
Following gene: 182680667
Centisome position: 5.31
GC content: 42.13
Gene sequence:
>432_bases ATGCATATTTACGGTATGGGAAGTCCCTTATTGGGACTTCTCCTAACTTTTATCGTGAAACGTATTTCGGCTTGGCTAAA GATCAGAAAAGCCCAAAAGGAACAAACCAAGAAACAAATTATCAAGAAAGCACTGGATGAGATCGAAACCATTGCTTCCC AACCCTTCAATCCATTGCCCTTCACCAAAGAAGCCGTTGAATGCTTCATGTACTTCGTATGCAGCTTCACCATGATCAAC ATCGCACTGATCAATGCTTCAAATACAAATCTAGTCATTCAAATCATTAACTATCTGCTGCATTTCACTGCGAGTGCATT CCTAGGGTTGTCCCTTGGCGCTTTAATTGAATTAAGACGACAACTGAAAATCAAGTTGGACCCTCAGAAAGCCACCGAAC GGCTACGTGCCATGCTCGAGAAACTGGATTAA
Upstream 100 bases:
>100_bases GCTCAGCCAGCAACGAAGGCAAACGCGGCATGGCCACCGGGCGTCCTGTCGGCCTACTGACACAGTGGCTCGTGGATCGA TGCTAAGCGACCACGCATGG
Downstream 100 bases:
>100_bases TGGCACGCGCCGACTTCTATTTGATTGCCAAACCGCGCTTTCTTGAGAAACCGCTGCAATTAGTCTGCGAATTAGTCCGC AAAGCCTACGACACCCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MHIYGMGSPLLGLLLTFIVKRISAWLKIRKAQKEQTKKQIIKKALDEIETIASQPFNPLPFTKEAVECFMYFVCSFTMIN IALINASNTNLVIQIINYLLHFTASAFLGLSLGALIELRRQLKIKLDPQKATERLRAMLEKLD
Sequences:
>Translated_143_residues MHIYGMGSPLLGLLLTFIVKRISAWLKIRKAQKEQTKKQIIKKALDEIETIASQPFNPLPFTKEAVECFMYFVCSFTMIN IALINASNTNLVIQIINYLLHFTASAFLGLSLGALIELRRQLKIKLDPQKATERLRAMLEKLD >Mature_143_residues MHIYGMGSPLLGLLLTFIVKRISAWLKIRKAQKEQTKKQIIKKALDEIETIASQPFNPLPFTKEAVECFMYFVCSFTMIN IALINASNTNLVIQIINYLLHFTASAFLGLSLGALIELRRQLKIKLDPQKATERLRAMLEKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16310; Mature: 16310
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIYGMGSPLLGLLLTFIVKRISAWLKIRKAQKEQTKKQIIKKALDEIETIASQPFNPLP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FTKEAVECFMYFVCSFTMINIALINASNTNLVIQIINYLLHFTASAFLGLSLGALIELRR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLKIKLDPQKATERLRAMLEKLD HHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MHIYGMGSPLLGLLLTFIVKRISAWLKIRKAQKEQTKKQIIKKALDEIETIASQPFNPLP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FTKEAVECFMYFVCSFTMINIALINASNTNLVIQIINYLLHFTASAFLGLSLGALIELRR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLKIKLDPQKATERLRAMLEKLD HHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA