Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is tyrC [H]
Identifier: 182677305
GI number: 182677305
Start: 352814
End: 353776
Strand: Direct
Name: tyrC [H]
Synonym: Bind_0308
Alternate gene names: 182677305
Gene position: 352814-353776 (Clockwise)
Preceding gene: 182677304
Following gene: 182677307
Centisome position: 8.46
GC content: 59.71
Gene sequence:
>963_bases GTGGCTGATGGTTTGGGCGCCCGGCTCGAGACGCCCCTGTTCGAGCAATTGACGCTCATCGGCGTTGGTCTGATCGGTTC TTCACTGGCGCGTGTCGCGAGCCGCAAGGGTCTTGCGCGCCGCATTGTCGCTTATGACAATGATCCCGATGTCCGCGCCA AGGTCGAACGGCTCGCCCTTGCCGATGTCGTTTCGCCGAGCCCGGAAAAAGCCGTGCAGGGCGCCGATCTCGTCATCCTC TGCGCGCCGGTTGGCGCCATGGGGGAGATTGCGAAAACCATCGCGCCGCATCTCGCACCAGGAACAATCGTTTCCGACGT CGGTTCGGTCAAGGAAGCGATCATCGAAGCGGTCGCGCCCGCCCTTCCGGGCCATGTGCATTTCGTGCCCGCACATCCCG TCGCGGGTACGGAATATTCGGGGCCCGCGGCCGGTTTCGCCACTTTGTTCTTGAATCGCTGGTGCATTCTGACACCGACG CCAGACATTGATCCGGAGATTGTCGCGCGGGTCGAGAGCTTCTGGAGCGCGGCTGGCGCCAATGTCGAGATCATGAAGGC GACGCATCATGATCTGGTGCTCGCCATCACCAGCCATGTGCCGCATCTCATTGCCTATAATATCGTTGGCACGGCGGCCG ATCTCGAAACGGTGACGCAATCGGAAGTCATCAAATTTTCCGCCGGCGGCTTTCGCGATTTCACTCGTATCGCCGCGTCC GATCCCACTATGTGGCGCGATATTTTCCTGAATAATAAGAGCGCCGTCATCGAAATGCTCGGCCGTTTCACCGAGGATCT GATCGCGCTGCAACGTATGATCCGCCACGAGGATGGTGACGGCTTGTTCAAATTGTTCACGCGCACACGCGCGATCCGCC GCAACATTATCGAACAGGGTCAGGAAACAGCAGCTCCTGATTTCGGCCGCGGCGTGGCGAAGGATACGGATGAAGAAAGG TGA
Upstream 100 bases:
>100_bases GGCCTGCCGAATTGTTTGCGCCTGACCGTTGGGACGGAGGAGGCTAATCGGCTTGTCGTAGACGGCTTGAAGGATTTTTG CCGCGAAAGGATGAAACAGC
Downstream 100 bases:
>100_bases AGGGTGGGGGATGTATGCTGATTGCCGTTGATTACTCAGTAGATACCCTCAACGCGTTGCAACGCCGGCGCTGCGAAATC AACAAATGCTCGAACGGTCG
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MADGLGARLETPLFEQLTLIGVGLIGSSLARVASRKGLARRIVAYDNDPDVRAKVERLALADVVSPSPEKAVQGADLVIL CAPVGAMGEIAKTIAPHLAPGTIVSDVGSVKEAIIEAVAPALPGHVHFVPAHPVAGTEYSGPAAGFATLFLNRWCILTPT PDIDPEIVARVESFWSAAGANVEIMKATHHDLVLAITSHVPHLIAYNIVGTAADLETVTQSEVIKFSAGGFRDFTRIAAS DPTMWRDIFLNNKSAVIEMLGRFTEDLIALQRMIRHEDGDGLFKLFTRTRAIRRNIIEQGQETAAPDFGRGVAKDTDEER
Sequences:
>Translated_320_residues MADGLGARLETPLFEQLTLIGVGLIGSSLARVASRKGLARRIVAYDNDPDVRAKVERLALADVVSPSPEKAVQGADLVIL CAPVGAMGEIAKTIAPHLAPGTIVSDVGSVKEAIIEAVAPALPGHVHFVPAHPVAGTEYSGPAAGFATLFLNRWCILTPT PDIDPEIVARVESFWSAAGANVEIMKATHHDLVLAITSHVPHLIAYNIVGTAADLETVTQSEVIKFSAGGFRDFTRIAAS DPTMWRDIFLNNKSAVIEMLGRFTEDLIALQRMIRHEDGDGLFKLFTRTRAIRRNIIEQGQETAAPDFGRGVAKDTDEER >Mature_319_residues ADGLGARLETPLFEQLTLIGVGLIGSSLARVASRKGLARRIVAYDNDPDVRAKVERLALADVVSPSPEKAVQGADLVILC APVGAMGEIAKTIAPHLAPGTIVSDVGSVKEAIIEAVAPALPGHVHFVPAHPVAGTEYSGPAAGFATLFLNRWCILTPTP DIDPEIVARVESFWSAAGANVEIMKATHHDLVLAITSHVPHLIAYNIVGTAADLETVTQSEVIKFSAGGFRDFTRIAASD PTMWRDIFLNNKSAVIEMLGRFTEDLIALQRMIRHEDGDGLFKLFTRTRAIRRNIIEQGQETAAPDFGRGVAKDTDEER
Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.43; =1.3.1.12 [H]
Molecular weight: Translated: 34341; Mature: 34210
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADGLGARLETPLFEQLTLIGVGLIGSSLARVASRKGLARRIVAYDNDPDVRAKVERLAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHHHHHHHHHH ADVVSPSPEKAVQGADLVILCAPVGAMGEIAKTIAPHLAPGTIVSDVGSVKEAIIEAVAP HHHCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALPGHVHFVPAHPVAGTEYSGPAAGFATLFLNRWCILTPTPDIDPEIVARVESFWSAAGA CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCC NVEIMKATHHDLVLAITSHVPHLIAYNIVGTAADLETVTQSEVIKFSAGGFRDFTRIAAS CEEEEEECCCCEEEEHHHHCCHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHCC DPTMWRDIFLNNKSAVIEMLGRFTEDLIALQRMIRHEDGDGLFKLFTRTRAIRRNIIEQG CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC QETAAPDFGRGVAKDTDEER HHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADGLGARLETPLFEQLTLIGVGLIGSSLARVASRKGLARRIVAYDNDPDVRAKVERLAL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHHHHHHHHHH ADVVSPSPEKAVQGADLVILCAPVGAMGEIAKTIAPHLAPGTIVSDVGSVKEAIIEAVAP HHHCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALPGHVHFVPAHPVAGTEYSGPAAGFATLFLNRWCILTPTPDIDPEIVARVESFWSAAGA CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHCCC NVEIMKATHHDLVLAITSHVPHLIAYNIVGTAADLETVTQSEVIKFSAGGFRDFTRIAAS CEEEEEECCCCEEEEHHHHCCHHHHHHHHCCHHHHHHHHHHHHEEECCCCHHHHHHHHCC DPTMWRDIFLNNKSAVIEMLGRFTEDLIALQRMIRHEDGDGLFKLFTRTRAIRRNIIEQG CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC QETAAPDFGRGVAKDTDEER HHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7916685 [H]