Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677185
Identifier: 182677185
GI number: 182677185
Start: 221573
End: 222784
Strand: Direct
Name: 182677185
Synonym: Bind_0186
Alternate gene names: NA
Gene position: 221573-222784 (Clockwise)
Preceding gene: 182677184
Following gene: 182677190
Centisome position: 5.31
GC content: 56.68
Gene sequence:
>1212_bases ATGACATTACCCATGGCATCAAAAAATCGCTTTTCTCGCAACCAAAGCGATGGCACCCGGCGATCCTCCTTTTCTTGCGA TAATCCAGATCGCCGGGAAATAGTGTGCGGATGCGGCGTGGCATCCTTCAGTGTGTTGCTGGCTGGCCTTTTGGGCGATG CCTCACCAGCCAAGGCGCAAACACTGGCCTTGCCGGTGCCTGAACTCGATGCCTTGAGTATCCGCATCGTGACGGATAGC TATCAATTCGCCGTGGCGCCGAGCCGCAAAATGGATACGCTTTCCATCGAGCATTTCGGCTGGGGCATAAGCCCGGATTA TCCGCCAGGTCCCACTCTGGCAAGTGAATTCGGCCTGTCTATGGTTGTGACATCATCGCGGAAGGGGGAAACACGGAAGA CACTCATCGATTTTGGCTTCACCGCGATGGCGTTGAACAATAATCTCCAGCTTTTGGGGATTCAGCCGGCCGAGATCGAT GCTCTTGTTCTGAGCCATGGGCATTATGATCATTTTGGTGGTCTTGCCGGCTTTCTGCGGCAATACAAGGATCAATTGAA ACCGAAACTGCCTTTCTATGTGGGAGGCGAAGATTGTTTTTGCGCCCGAGAATGGACGGCGCCACCCGTCAAAGGGAATT TCGGTGTCATCGACCGGGAAGCTTTGGCTGCTGCCAAGCTCAGCGTAACCGCGATGGAACAGCCGGCCCTCGTGGCCGAT CATGGTTTTATCTCGGGTCAGATCGGCCAGCGGAGTTTCGAGAAGCTTCTGTCTCCCAGCGCGATGCATGTTGGCGTGAC AGAGGGCTCTGGCTGCTATCCCGACCGTTTGCCGGAGAGCGAACGCGGGCCGGGCTCCATCCCCGATCAGTTCCGGCATG AGATCGCCACATCCTTCCATGTGAAGGGGCGCGGCCTCGTCATTCTGACGTCTTGTAGCCACCGAGGAGTGGTCAATGCG GTCCGGCAGGCGCAGACAGTCTCCGGCATCGAGAAAGTCCACGCCATCATCGGCGGCTTTCATCTCGCGCCTTATCCGGC GGATTATGTCCGCCAGACAGTCGCGGCGCTCAAGGAGATCGGACCGGATTATATCGTGCCGCTGCATTGCTCCGGCGAGC CCTTTTATGAAATGGCCAAAGCGGAAATGCCAGACAAGCTGGTCCGCGCCTATACGGGCACGCAATTGGTCTTTTCCGGT TCCGCTTCTTAA
Upstream 100 bases:
>100_bases GTTAAACAATCAAAACATCCCAGGTTAATGGCGGCGTCATAGTTAACGCATCAGTCAAATTGTTGATATAACTATTATCG ATGTTGGGAGGTAATTGACT
Downstream 100 bases:
>100_bases GGGGCTCTGCTGCGGGGGCGTCGGCTGGATTAGGCCGGCCGGAGGATTCTTGTGAGAATAACGTTCTTGAAACGCTGAAA GGGGAGGGGACTGCGTTCGG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MTLPMASKNRFSRNQSDGTRRSSFSCDNPDRREIVCGCGVASFSVLLAGLLGDASPAKAQTLALPVPELDALSIRIVTDS YQFAVAPSRKMDTLSIEHFGWGISPDYPPGPTLASEFGLSMVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEID ALVLSHGHYDHFGGLAGFLRQYKDQLKPKLPFYVGGEDCFCAREWTAPPVKGNFGVIDREALAAAKLSVTAMEQPALVAD HGFISGQIGQRSFEKLLSPSAMHVGVTEGSGCYPDRLPESERGPGSIPDQFRHEIATSFHVKGRGLVILTSCSHRGVVNA VRQAQTVSGIEKVHAIIGGFHLAPYPADYVRQTVAALKEIGPDYIVPLHCSGEPFYEMAKAEMPDKLVRAYTGTQLVFSG SAS
Sequences:
>Translated_403_residues MTLPMASKNRFSRNQSDGTRRSSFSCDNPDRREIVCGCGVASFSVLLAGLLGDASPAKAQTLALPVPELDALSIRIVTDS YQFAVAPSRKMDTLSIEHFGWGISPDYPPGPTLASEFGLSMVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEID ALVLSHGHYDHFGGLAGFLRQYKDQLKPKLPFYVGGEDCFCAREWTAPPVKGNFGVIDREALAAAKLSVTAMEQPALVAD HGFISGQIGQRSFEKLLSPSAMHVGVTEGSGCYPDRLPESERGPGSIPDQFRHEIATSFHVKGRGLVILTSCSHRGVVNA VRQAQTVSGIEKVHAIIGGFHLAPYPADYVRQTVAALKEIGPDYIVPLHCSGEPFYEMAKAEMPDKLVRAYTGTQLVFSG SAS >Mature_402_residues TLPMASKNRFSRNQSDGTRRSSFSCDNPDRREIVCGCGVASFSVLLAGLLGDASPAKAQTLALPVPELDALSIRIVTDSY QFAVAPSRKMDTLSIEHFGWGISPDYPPGPTLASEFGLSMVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEIDA LVLSHGHYDHFGGLAGFLRQYKDQLKPKLPFYVGGEDCFCAREWTAPPVKGNFGVIDREALAAAKLSVTAMEQPALVADH GFISGQIGQRSFEKLLSPSAMHVGVTEGSGCYPDRLPESERGPGSIPDQFRHEIATSFHVKGRGLVILTSCSHRGVVNAV RQAQTVSGIEKVHAIIGGFHLAPYPADYVRQTVAALKEIGPDYIVPLHCSGEPFYEMAKAEMPDKLVRAYTGTQLVFSGS AS
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 43446; Mature: 43315
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPMASKNRFSRNQSDGTRRSSFSCDNPDRREIVCGCGVASFSVLLAGLLGDASPAKAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCE TLALPVPELDALSIRIVTDSYQFAVAPSRKMDTLSIEHFGWGISPDYPPGPTLASEFGLS EEECCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEHHCCCCCCCCCCCCCCHHHHCCEE MVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEIDALVLSHGHYDHFGGLAGFLR EEEECCCCCCHHHHHHHCCEEEEEECCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHH QYKDQLKPKLPFYVGGEDCFCAREWTAPPVKGNFGVIDREALAAAKLSVTAMEQPALVAD HHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCEEEC HGFISGQIGQRSFEKLLSPSAMHVGVTEGSGCYPDRLPESERGPGSIPDQFRHEIATSFH CCCEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEE VKGRGLVILTSCSHRGVVNAVRQAQTVSGIEKVHAIIGGFHLAPYPADYVRQTVAALKEI ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC GPDYIVPLHCSGEPFYEMAKAEMPDKLVRAYTGTQLVFSGSAS CCCEEEEEEECCCHHHHHHHHCCCHHHHHHHCCCEEEEECCCC >Mature Secondary Structure TLPMASKNRFSRNQSDGTRRSSFSCDNPDRREIVCGCGVASFSVLLAGLLGDASPAKAQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCE TLALPVPELDALSIRIVTDSYQFAVAPSRKMDTLSIEHFGWGISPDYPPGPTLASEFGLS EEECCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEHHCCCCCCCCCCCCCCHHHHCCEE MVVTSSRKGETRKTLIDFGFTAMALNNNLQLLGIQPAEIDALVLSHGHYDHFGGLAGFLR EEEECCCCCCHHHHHHHCCEEEEEECCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHH QYKDQLKPKLPFYVGGEDCFCAREWTAPPVKGNFGVIDREALAAAKLSVTAMEQPALVAD HHHHHCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCEEEC HGFISGQIGQRSFEKLLSPSAMHVGVTEGSGCYPDRLPESERGPGSIPDQFRHEIATSFH CCCEECCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEE VKGRGLVILTSCSHRGVVNAVRQAQTVSGIEKVHAIIGGFHLAPYPADYVRQTVAALKEI ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC GPDYIVPLHCSGEPFYEMAKAEMPDKLVRAYTGTQLVFSGSAS CCCEEEEEEECCCHHHHHHHHCCCHHHHHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]