Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17547360
Identifier: 17547360
GI number: 17547360
Start: 2842362
End: 2842550
Strand: Direct
Name: 17547360
Synonym: RSc2641
Alternate gene names: NA
Gene position: 2842362-2842550 (Clockwise)
Preceding gene: 17547359
Following gene: 17547367
Centisome position: 76.48
GC content: 59.26
Gene sequence:
>189_bases ATGCACAAGCTGCCTATTCTGACGGTGCTTCTGCTGTTGACCTTGACAGCCGTCACGACGTTCATCTGCCTGTCCGGCGC CGTCACGCCGCGTGACACGGAGTATGGCAGCGGGAAAGCGATCTTCAAGCACTACTTCATGCAACCCCGCATGCTGCAGA CCCCGCGCGCACTGGGCGTAACAAGTTAG
Upstream 100 bases:
>100_bases TGCGTGAATTGGAATGGCACGTCGATTGCGAGCATCCGATCGGCCACCTATGATGCAAGAAAAATCGCGGGGGGCGCGAC CTTATTCGAGGGTTCGTACC
Downstream 100 bases:
>100_bases CACACACTTGCCGTCATCCGCCCAGCTTATCGATGCGGCGCCGGTCGCGCTTGGTCGGCCGGCCGGCGATCTGCGTGGCG GGTTCCCGGTACAGGTGCCG
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MHKLPILTVLLLLTLTAVTTFICLSGAVTPRDTEYGSGKAIFKHYFMQPRMLQTPRALGVTS
Sequences:
>Translated_62_residues MHKLPILTVLLLLTLTAVTTFICLSGAVTPRDTEYGSGKAIFKHYFMQPRMLQTPRALGVTS >Mature_62_residues MHKLPILTVLLLLTLTAVTTFICLSGAVTPRDTEYGSGKAIFKHYFMQPRMLQTPRALGVTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6850; Mature: 6850
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLPILTVLLLLTLTAVTTFICLSGAVTPRDTEYGSGKAIFKHYFMQPRMLQTPRALGV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCC TS CC >Mature Secondary Structure MHKLPILTVLLLLTLTAVTTFICLSGAVTPRDTEYGSGKAIFKHYFMQPRMLQTPRALGV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCCCCCC TS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA