Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is 17547359
Identifier: 17547359
GI number: 17547359
Start: 2842099
End: 2842314
Strand: Direct
Name: 17547359
Synonym: RSc2640
Alternate gene names: NA
Gene position: 2842099-2842314 (Clockwise)
Preceding gene: 17547351
Following gene: 17547360
Centisome position: 76.47
GC content: 59.72
Gene sequence:
>216_bases ATGCGGGGTCCGATGCCCAGATTGGTGCACGCGGCGCCAGCGATCGATCCGCTGGAGATCACAAGACAATTCTCCCCGAT GTGGGGCATCTGGCGCGCTTTTCAAGGGCGCGGCATGCGCGGCTGCAGTGCGCCACGCATCACGAAATACGACGTTACAA CTTTGCGTGAATTGGAATGGCACGTCGATTGCGAGCATCCGATCGGCCACCTATGA
Upstream 100 bases:
>100_bases CCGGCTGCTGCGGCGGAGGATTGCGCCGACTCGGCGGCTTGCGTATCCGGTTGCGAAGTGGGTTCCGAAGTGTGTTTCAT AGCGCTGGGTAGAAGGATCG
Downstream 100 bases:
>100_bases TGCAAGAAAAATCGCGGGGGGCGCGACCTTATTCGAGGGTTCGTACCATGCACAAGCTGCCTATTCTGACGGTGCTTCTG CTGTTGACCTTGACAGCCGT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRGPMPRLVHAAPAIDPLEITRQFSPMWGIWRAFQGRGMRGCSAPRITKYDVTTLRELEWHVDCEHPIGHL
Sequences:
>Translated_71_residues MRGPMPRLVHAAPAIDPLEITRQFSPMWGIWRAFQGRGMRGCSAPRITKYDVTTLRELEWHVDCEHPIGHL >Mature_71_residues MRGPMPRLVHAAPAIDPLEITRQFSPMWGIWRAFQGRGMRGCSAPRITKYDVTTLRELEWHVDCEHPIGHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8195; Mature: 8195
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPMPRLVHAAPAIDPLEITRQFSPMWGIWRAFQGRGMRGCSAPRITKYDVTTLRELEW CCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHE HVDCEHPIGHL ECCCCCCCCCC >Mature Secondary Structure MRGPMPRLVHAAPAIDPLEITRQFSPMWGIWRAFQGRGMRGCSAPRITKYDVTTLRELEW CCCCCCCHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHE HVDCEHPIGHL ECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA