Definition | Ralstonia solanacearum GMI1000, complete genome. |
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Accession | NC_003295 |
Length | 3,716,413 |
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The map label for this gene is modB [H]
Identifier: 17547350
GI number: 17547350
Start: 2833456
End: 2834163
Strand: Direct
Name: modB [H]
Synonym: RSc2631
Alternate gene names: 17547350
Gene position: 2833456-2834163 (Clockwise)
Preceding gene: 17547349
Following gene: 17547351
Centisome position: 76.24
GC content: 72.18
Gene sequence:
>708_bases ATGGACATCTGGTCGGCCACCGTCGAGGCGTTCGCCCTGCTCACCCGCGGCGACGCGGCGCTCTGGGTGATCGTCTGGAC CTCGCTGAAGGTGGCGCTGGCCGGCCTGCTGCTGGCCGCGCCGCCGGCGCTGCTGCTGGCCTACGCCATCGCCATGCACC GCTTCCCCGGACGCCGGGCGCTGGTCGTGCTGGCGCAGGCCTCGCTGTCGTTTCCGACCGTGCTGATCGGACTGGTGCTC TACCTGCTGCTGTCGCGCCAGGGGCCGCTGGGCGGCTTCGGGCTGCTGTTCACGCAAGGGGGCATGATCCTCGGCCAGGC GGTGCTCGGCCTGCCGGTGATCATAGCGTTCGCGTTGGCCACCTTCGAGCGCGCCGACCCGCGCCTGGCGGAGACCGCCC GCGTGCTCGGCGCCGGCCCGGTGCGGCTGCTGTTCACAGTGTTCCGCGAACTGCGCTTCGGCCTGGGCGCCGCCGTGGTG GCGGGCTTCGGCCGGGTGATCGCCGAGGTCGGATCGGCGCTGATGGTCGGCGGCAACATCGAGGGCGTCACGCGCACCAT GACCACCGCGATTGCGCTGGAGACCAGCAAGGGCGAGTTCGCCCAGGGCATTGCGCTGGGCATCGTGCTGATCGCGCTGG CGCTGCTGGTCAACCTGGTGCTGGCGTGGCTGCAGGGCGCCGGCGCCTTCCGCCGCCACACCGCATGA
Upstream 100 bases:
>100_bases TGACCACCATCGACGCCGCCGTCACGGCCTATGTGACGGCGGTCAAGGACGGCACCTTCCCCGGCCCGGAGCACAGCTTC ACCGCCTGAGCGCGCCGCGC
Downstream 100 bases:
>100_bases GCGCCCGATGACCACCTCGCCCCGCCCCCTGATGGTGTTCGAACAGCTGCACTGCCGCCACGGCGAGCGCCTGCTGTTCG ACATTCCGCGCCTGGCGCTG
Product: transmembrane ABC transporter protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MDIWSATVEAFALLTRGDAALWVIVWTSLKVALAGLLLAAPPALLLAYAIAMHRFPGRRALVVLAQASLSFPTVLIGLVL YLLLSRQGPLGGFGLLFTQGGMILGQAVLGLPVIIAFALATFERADPRLAETARVLGAGPVRLLFTVFRELRFGLGAAVV AGFGRVIAEVGSALMVGGNIEGVTRTMTTAIALETSKGEFAQGIALGIVLIALALLVNLVLAWLQGAGAFRRHTA
Sequences:
>Translated_235_residues MDIWSATVEAFALLTRGDAALWVIVWTSLKVALAGLLLAAPPALLLAYAIAMHRFPGRRALVVLAQASLSFPTVLIGLVL YLLLSRQGPLGGFGLLFTQGGMILGQAVLGLPVIIAFALATFERADPRLAETARVLGAGPVRLLFTVFRELRFGLGAAVV AGFGRVIAEVGSALMVGGNIEGVTRTMTTAIALETSKGEFAQGIALGIVLIALALLVNLVLAWLQGAGAFRRHTA >Mature_235_residues MDIWSATVEAFALLTRGDAALWVIVWTSLKVALAGLLLAAPPALLLAYAIAMHRFPGRRALVVLAQASLSFPTVLIGLVL YLLLSRQGPLGGFGLLFTQGGMILGQAVLGLPVIIAFALATFERADPRLAETARVLGAGPVRLLFTVFRELRFGLGAAVV AGFGRVIAEVGSALMVGGNIEGVTRTMTTAIALETSKGEFAQGIALGIVLIALALLVNLVLAWLQGAGAFRRHTA
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4662
COG function: function code H; ABC-type tungstate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=213, Percent_Identity=30.9859154929577, Blast_Score=71, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24540; Mature: 24540
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIWSATVEAFALLTRGDAALWVIVWTSLKVALAGLLLAAPPALLLAYAIAMHRFPGRRA CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCE LVVLAQASLSFPTVLIGLVLYLLLSRQGPLGGFGLLFTQGGMILGQAVLGLPVIIAFALA EEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH TFERADPRLAETARVLGAGPVRLLFTVFRELRFGLGAAVVAGFGRVIAEVGSALMVGGNI HHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC EGVTRTMTTAIALETSKGEFAQGIALGIVLIALALLVNLVLAWLQGAGAFRRHTA CHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MDIWSATVEAFALLTRGDAALWVIVWTSLKVALAGLLLAAPPALLLAYAIAMHRFPGRRA CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCE LVVLAQASLSFPTVLIGLVLYLLLSRQGPLGGFGLLFTQGGMILGQAVLGLPVIIAFALA EEEEEHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH TFERADPRLAETARVLGAGPVRLLFTVFRELRFGLGAAVVAGFGRVIAEVGSALMVGGNI HHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC EGVTRTMTTAIALETSKGEFAQGIALGIVLIALALLVNLVLAWLQGAGAFRRHTA CHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]