| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17546487
Identifier: 17546487
GI number: 17546487
Start: 1895162
End: 1896118
Strand: Direct
Name: 17546487
Synonym: RSc1768
Alternate gene names: NA
Gene position: 1895162-1896118 (Clockwise)
Preceding gene: 17546486
Following gene: 17546488
Centisome position: 50.99
GC content: 70.01
Gene sequence:
>957_bases ATGACGGACCTGATCCTGCATCACTACGCCACCTCGCCGTTCTCGGAGAAAGTGCGCCTGATCCTCGGCTACAAGGACCA GCCGTGGAAGTCCGTCACGGTGCCCGTGATCCTGCCCAAGCCTGAGGTGATGCCGCTCACCGGCGGCTACCGGCGCACGC CATTCCTGCAGATCGGCGCGGACATCTATTGCGATACCGCGCTGATCGCGCAGGTGCTGGAGTCGATCCATCCGGTGCCG ACGCTGTACCCGGCCGATCGCGCGGCGGCGGCGTTCGCCATGGCGCAGTGGGCCGATACCACGCTGTTCTGGGCGGCGGC CGCGTTCGTCGGCCAGCCCGAAGGCTTCAAGAGCCTGATGGCGGGCCTGCCGGAAGACTTCGCCAAGGCCTTCGTCGAAG ATCGCAAGGCGATGCGCGCGGGCGGCACGGGGCTGCGCACGCCGCTGCCGGAGGCGGTGTCCACGCTGCATGTCTTCCTG GCGCAGCTGGAGCGCCAGTTCGCCACTGGCGAACACATCTTCCTGTTCGGCGAGCAGCCGACCATCGCCGATTTTTCGGT CTACCACGCCCTGTGGTTCATCCGCCGCGCGACCGCGGTGGCCGGCATCCTCGACGCGCACCCGGAGGTGGTGGCCTGGA TGCACCGCGTGGCCGGCTTCGGCCACGCGCAGGCGCAGCCGATGACGCCGGCCGAGGCGCTGGACATCGCCAGGGCGGCC ACGCCGCGCGCGCTGACCGAGACCGGGGCCGGCTTCGATGCACGCTACGGCTTGCCCAAGGGCACGCGCGTGACGGTGTC GGCCACCGACTACGCCATCGATCCGGTCGAAGGCGAGCTGGTCGTCTCCACGCGCGATGCCGTCGGCGTGCTGCGCGACG ATCCGCGCGTCGGCCAGGTGGCGGTGCATTTCCCGCGCGTCGGCTATGCGGTGCGCAAGGTCGAGCCGGCCGGCTGA
Upstream 100 bases:
>100_bases CACGGCGCAGGCGGGGTGGTTCCAGTTCCAGCCGCTGTATGCGCGCATCGTCAAGGAACAACCCGACCTGCTGGACTGAA CAGCGACCCTCGGAGCCCCC
Downstream 100 bases:
>100_bases CCCGGCCGCGCCGATCGCTTTTTACAATCCGGGTCCATGACGACAACACGAGGAAGACACGTATGAAGCAATTCGCGGGC GGCGTGGCCGTCATCACGGG
Product: glutathione S-transferase-related protein
Products: NA
Alternate protein names: Glutathione S-Transferase-Related Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase Domain
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTDLILHHYATSPFSEKVRLILGYKDQPWKSVTVPVILPKPEVMPLTGGYRRTPFLQIGADIYCDTALIAQVLESIHPVP TLYPADRAAAAFAMAQWADTTLFWAAAAFVGQPEGFKSLMAGLPEDFAKAFVEDRKAMRAGGTGLRTPLPEAVSTLHVFL AQLERQFATGEHIFLFGEQPTIADFSVYHALWFIRRATAVAGILDAHPEVVAWMHRVAGFGHAQAQPMTPAEALDIARAA TPRALTETGAGFDARYGLPKGTRVTVSATDYAIDPVEGELVVSTRDAVGVLRDDPRVGQVAVHFPRVGYAVRKVEPAG
Sequences:
>Translated_318_residues MTDLILHHYATSPFSEKVRLILGYKDQPWKSVTVPVILPKPEVMPLTGGYRRTPFLQIGADIYCDTALIAQVLESIHPVP TLYPADRAAAAFAMAQWADTTLFWAAAAFVGQPEGFKSLMAGLPEDFAKAFVEDRKAMRAGGTGLRTPLPEAVSTLHVFL AQLERQFATGEHIFLFGEQPTIADFSVYHALWFIRRATAVAGILDAHPEVVAWMHRVAGFGHAQAQPMTPAEALDIARAA TPRALTETGAGFDARYGLPKGTRVTVSATDYAIDPVEGELVVSTRDAVGVLRDDPRVGQVAVHFPRVGYAVRKVEPAG >Mature_317_residues TDLILHHYATSPFSEKVRLILGYKDQPWKSVTVPVILPKPEVMPLTGGYRRTPFLQIGADIYCDTALIAQVLESIHPVPT LYPADRAAAAFAMAQWADTTLFWAAAAFVGQPEGFKSLMAGLPEDFAKAFVEDRKAMRAGGTGLRTPLPEAVSTLHVFLA QLERQFATGEHIFLFGEQPTIADFSVYHALWFIRRATAVAGILDAHPEVVAWMHRVAGFGHAQAQPMTPAEALDIARAAT PRALTETGAGFDARYGLPKGTRVTVSATDYAIDPVEGELVVSTRDAVGVLRDDPRVGQVAVHFPRVGYAVRKVEPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34531; Mature: 34400
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLILHHYATSPFSEKVRLILGYKDQPWKSVTVPVILPKPEVMPLTGGYRRTPFLQIGA CCCEEEEHHCCCCHHHCEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCCCCCEEEECC DIYCDTALIAQVLESIHPVPTLYPADRAAAAFAMAQWADTTLFWAAAAFVGQPEGFKSLM CCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AGLPEDFAKAFVEDRKAMRAGGTGLRTPLPEAVSTLHVFLAQLERQFATGEHIFLFGEQP HCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC TIADFSVYHALWFIRRATAVAGILDAHPEVVAWMHRVAGFGHAQAQPMTPAEALDIARAA CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC TPRALTETGAGFDARYGLPKGTRVTVSATDYAIDPVEGELVVSTRDAVGVLRDDPRVGQV CCCHHHHCCCCCCCCCCCCCCCEEEEEECCEEECCCCCEEEEEECCHHHEECCCCCCCEE AVHFPRVGYAVRKVEPAG EEECCCCCEEEEECCCCC >Mature Secondary Structure TDLILHHYATSPFSEKVRLILGYKDQPWKSVTVPVILPKPEVMPLTGGYRRTPFLQIGA CCEEEEHHCCCCHHHCEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCCCCCEEEECC DIYCDTALIAQVLESIHPVPTLYPADRAAAAFAMAQWADTTLFWAAAAFVGQPEGFKSLM CCEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH AGLPEDFAKAFVEDRKAMRAGGTGLRTPLPEAVSTLHVFLAQLERQFATGEHIFLFGEQP HCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC TIADFSVYHALWFIRRATAVAGILDAHPEVVAWMHRVAGFGHAQAQPMTPAEALDIARAA CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC TPRALTETGAGFDARYGLPKGTRVTVSATDYAIDPVEGELVVSTRDAVGVLRDDPRVGQV CCCHHHHCCCCCCCCCCCCCCCEEEEEECCEEECCCCCEEEEEECCHHHEECCCCCCCEE AVHFPRVGYAVRKVEPAG EEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA