Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is 17546369

Identifier: 17546369

GI number: 17546369

Start: 1773374

End: 1774990

Strand: Direct

Name: 17546369

Synonym: RSc1650

Alternate gene names: NA

Gene position: 1773374-1774990 (Clockwise)

Preceding gene: 17546368

Following gene: 17546370

Centisome position: 47.72

GC content: 67.47

Gene sequence:

>1617_bases
ATGCGAATTTCTGGCTGGACGACGATTCCGATGGCGCTGGCGGTGGCCGGCGTTCTGGCCCACCTGCAGGCGCAGGCGCA
GGTTCCAGCGCGGCACGAGCACCGGGCCAGCCGCGCCACGGCGCAGGCCGTCGAGGCGCAGCGCCTGGACCGTGACGACG
CGCGCTTCTTCCTGACCCGCACCGGTTTCTCGCCCACGGAGAGCGAGCTCGACGCCTACGCCGGCCTGACCCGCCGCGAG
GCCGTCGACCGCGTGCTGGCCCAGACCGGCACCGTCGCCACCCAGCCGTTGCCGGCATGGATCAACGAGCCGATCGTCAC
GGACGACAAGCAGGCTAATGACGAGGCTCGCAAGGTGGCCCGGCAGAAGAATCTCGCGCGGGAACTCGAAATGCGCGGCT
GGTGGATCAGCGAGATGATCAGGACGCCGTCCCCGCTGACCGAGCGGATGACGCTGTTCTGGCACAACCATTTCGTATCC
AGCTCGCAGAAGGTGGTGTTCGCGCAGCTGATGTATCGGCAGAACGTGCTGCTACGGCAGAACGCGGTCGGCAACTTCGG
GACGATGCTGCATGCCGTCAGCAAGGACCCGGCGATGCTGGTCTACCTGGATGCCGCCTCGAGCCGCAAGGGCAAGCCCA
ACGAGAACTTCGCCCGCGAAGTGATGGAGCTCTTCACACTGGGCGAGGGCCACTACACCGAACAAGACATCAAGGAAGCC
GCGCGCGCCTACACCGGCTGGAGCGTGGACCGCGAGCACGACTACGCCTATGTCTGGCTGCCGCAGCTGCATGACACCGG
CACCAAGACGGTGTTCGGCCGCAGCGGCGACTACGACGGCGACCAGATGCTCGATGTCCTGCTGGCGCGGCAGGAAACCG
CCGTGTTCATCGTGACCAAGCTGTGGCGCGAGTTCGTCTCGCCCGATCCGGACGCGGCGCAGGTCGCGCACGTCGCCGAG
GCCTTCCGCTCCAGCGGCTACGACATCAAGGTGGCGCTGCGCGAGCTCTTCATGACGCAGGCGTTCTGGGCGCCGCAGAC
GCGCGCGACGCTGGTGAAGTCGCCGGTGGAGATGATCGTCGGTACGCTCAAGCAGTTCAACGTGCAGTATTCGGACCCGG
CGCCGTTCGCGATCAAGTCCGCGCAGCTGGGGCAGAACCTGTTCGCCCCGCCCAACGTGAAGGGCTGGCCGGGCGGCGAT
GCGTGGATCAACTCCAACACGCTGCTGGGCCGCAAGCAGTTCCTCGACCAGCTGTTTCGCTCCACCGAGATGAAGGCGCC
GCCGGCGCAGGCGCAGAAGCCCGGCGTGATGATGGCGGCCATGCGCGAGGACCTGAAGCAGGGCGGCCCCGTGCCGGGCC
TGGGCGCGGCGTTGAAGGGCATGGGCCCGGAGGGCCGCTTCAAGCTGGCGCAGTCGCAGACCATGGTGTCGTTCAATGCG
GCCAGGTGGCTGGCCCAGTTCGGCGCCGAGGCCAACGATCCGCCCCAGCTGGGGCCGCGCCTGTCCATCCAGCATGCCGT
GCTGCCGGTCGACCCCACGGTGCCGATTCCCGTCAAGCTGGCCGGTGCCGCTTATCTGCGCACGCTGTTGATGGATCCGG
CCTATCAACTCAAGTGA

Upstream 100 bases:

>100_bases
CGCGCGATATCTATCACCGTGGCGGTTAGTCGGGCGCTTGGCCGCCGTGCATCGTCACGGCATCCGGCCGATGCGTCCGG
GGTCGAAGTAGGGGACGGAT

Downstream 100 bases:

>100_bases
CCCTCACCCCAAGCGTCGGAGGACATCATGGAACGTCGCGATTTTCTGAAAGCGGGTGCGATGCTCGGCATGGGTGGCGC
GCTGCCGGGCGTTGTCTTTG

Product: signal peptide protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MRISGWTTIPMALAVAGVLAHLQAQAQVPARHEHRASRATAQAVEAQRLDRDDARFFLTRTGFSPTESELDAYAGLTRRE
AVDRVLAQTGTVATQPLPAWINEPIVTDDKQANDEARKVARQKNLARELEMRGWWISEMIRTPSPLTERMTLFWHNHFVS
SSQKVVFAQLMYRQNVLLRQNAVGNFGTMLHAVSKDPAMLVYLDAASSRKGKPNENFAREVMELFTLGEGHYTEQDIKEA
ARAYTGWSVDREHDYAYVWLPQLHDTGTKTVFGRSGDYDGDQMLDVLLARQETAVFIVTKLWREFVSPDPDAAQVAHVAE
AFRSSGYDIKVALRELFMTQAFWAPQTRATLVKSPVEMIVGTLKQFNVQYSDPAPFAIKSAQLGQNLFAPPNVKGWPGGD
AWINSNTLLGRKQFLDQLFRSTEMKAPPAQAQKPGVMMAAMREDLKQGGPVPGLGAALKGMGPEGRFKLAQSQTMVSFNA
ARWLAQFGAEANDPPQLGPRLSIQHAVLPVDPTVPIPVKLAGAAYLRTLLMDPAYQLK

Sequences:

>Translated_538_residues
MRISGWTTIPMALAVAGVLAHLQAQAQVPARHEHRASRATAQAVEAQRLDRDDARFFLTRTGFSPTESELDAYAGLTRRE
AVDRVLAQTGTVATQPLPAWINEPIVTDDKQANDEARKVARQKNLARELEMRGWWISEMIRTPSPLTERMTLFWHNHFVS
SSQKVVFAQLMYRQNVLLRQNAVGNFGTMLHAVSKDPAMLVYLDAASSRKGKPNENFAREVMELFTLGEGHYTEQDIKEA
ARAYTGWSVDREHDYAYVWLPQLHDTGTKTVFGRSGDYDGDQMLDVLLARQETAVFIVTKLWREFVSPDPDAAQVAHVAE
AFRSSGYDIKVALRELFMTQAFWAPQTRATLVKSPVEMIVGTLKQFNVQYSDPAPFAIKSAQLGQNLFAPPNVKGWPGGD
AWINSNTLLGRKQFLDQLFRSTEMKAPPAQAQKPGVMMAAMREDLKQGGPVPGLGAALKGMGPEGRFKLAQSQTMVSFNA
ARWLAQFGAEANDPPQLGPRLSIQHAVLPVDPTVPIPVKLAGAAYLRTLLMDPAYQLK
>Mature_538_residues
MRISGWTTIPMALAVAGVLAHLQAQAQVPARHEHRASRATAQAVEAQRLDRDDARFFLTRTGFSPTESELDAYAGLTRRE
AVDRVLAQTGTVATQPLPAWINEPIVTDDKQANDEARKVARQKNLARELEMRGWWISEMIRTPSPLTERMTLFWHNHFVS
SSQKVVFAQLMYRQNVLLRQNAVGNFGTMLHAVSKDPAMLVYLDAASSRKGKPNENFAREVMELFTLGEGHYTEQDIKEA
ARAYTGWSVDREHDYAYVWLPQLHDTGTKTVFGRSGDYDGDQMLDVLLARQETAVFIVTKLWREFVSPDPDAAQVAHVAE
AFRSSGYDIKVALRELFMTQAFWAPQTRATLVKSPVEMIVGTLKQFNVQYSDPAPFAIKSAQLGQNLFAPPNVKGWPGGD
AWINSNTLLGRKQFLDQLFRSTEMKAPPAQAQKPGVMMAAMREDLKQGGPVPGLGAALKGMGPEGRFKLAQSQTMVSFNA
ARWLAQFGAEANDPPQLGPRLSIQHAVLPVDPTVPIPVKLAGAAYLRTLLMDPAYQLK

Specific function: Unknown

COG id: COG5267

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59783; Mature: 59783

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISGWTTIPMALAVAGVLAHLQAQAQVPARHEHRASRATAQAVEAQRLDRDDARFFLTR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TGFSPTESELDAYAGLTRREAVDRVLAQTGTVATQPLPAWINEPIVTDDKQANDEARKVA
CCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH
RQKNLARELEMRGWWISEMIRTPSPLTERMTLFWHNHFVSSSQKVVFAQLMYRQNVLLRQ
HHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NAVGNFGTMLHAVSKDPAMLVYLDAASSRKGKPNENFAREVMELFTLGEGHYTEQDIKEA
CCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
ARAYTGWSVDREHDYAYVWLPQLHDTGTKTVFGRSGDYDGDQMLDVLLARQETAVFIVTK
HHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHH
LWREFVSPDPDAAQVAHVAEAFRSSGYDIKVALRELFMTQAFWAPQTRATLVKSPVEMIV
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GTLKQFNVQYSDPAPFAIKSAQLGQNLFAPPNVKGWPGGDAWINSNTLLGRKQFLDQLFR
HHHHHCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
STEMKAPPAQAQKPGVMMAAMREDLKQGGPVPGLGAALKGMGPEGRFKLAQSQTMVSFNA
HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHH
ARWLAQFGAEANDPPQLGPRLSIQHAVLPVDPTVPIPVKLAGAAYLRTLLMDPAYQLK
HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRISGWTTIPMALAVAGVLAHLQAQAQVPARHEHRASRATAQAVEAQRLDRDDARFFLTR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
TGFSPTESELDAYAGLTRREAVDRVLAQTGTVATQPLPAWINEPIVTDDKQANDEARKVA
CCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHH
RQKNLARELEMRGWWISEMIRTPSPLTERMTLFWHNHFVSSSQKVVFAQLMYRQNVLLRQ
HHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NAVGNFGTMLHAVSKDPAMLVYLDAASSRKGKPNENFAREVMELFTLGEGHYTEQDIKEA
CCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
ARAYTGWSVDREHDYAYVWLPQLHDTGTKTVFGRSGDYDGDQMLDVLLARQETAVFIVTK
HHHHCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHH
LWREFVSPDPDAAQVAHVAEAFRSSGYDIKVALRELFMTQAFWAPQTRATLVKSPVEMIV
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GTLKQFNVQYSDPAPFAIKSAQLGQNLFAPPNVKGWPGGDAWINSNTLLGRKQFLDQLFR
HHHHHCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
STEMKAPPAQAQKPGVMMAAMREDLKQGGPVPGLGAALKGMGPEGRFKLAQSQTMVSFNA
HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHH
ARWLAQFGAEANDPPQLGPRLSIQHAVLPVDPTVPIPVKLAGAAYLRTLLMDPAYQLK
HHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA