Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is lplT [H]

Identifier: 17546283

GI number: 17546283

Start: 1679169

End: 1681076

Strand: Direct

Name: lplT [H]

Synonym: RSc1564

Alternate gene names: 17546283

Gene position: 1679169-1681076 (Clockwise)

Preceding gene: 17546282

Following gene: 17546284

Centisome position: 45.18

GC content: 67.56

Gene sequence:

>1908_bases
ATGAGCCAATCGAGCCAGTTTTCCCTGCTGAAGCAGCGCCGCTTCGCCCCGTTTTTCTGGACCCAGTTCCTGGGCGCCAT
GAACGACAACGTGTTCAAGGTCGCCTTCTCATCGCTGGTCACCTATCACGCCGCGCTGTTCGGCAACGCGGACCCGGCCT
CGGCAGCGTTCCTGATCTCGGCGATCTTCATCGCGCCGTTCGTGCTGCTGTCGGCCACCAGCGGGCAGATCGCCGACCGC
ATGGACAAGGCCCGGCTGATCCGCCTGGTGAAGACGCTGGAGATCGCCATCATGGCGATCGGCTGCGCGGGCTTTGCGCT
GCGCCGGGTCGAGCTGCTGTACCTGTGTACCTTCCTGATGGGCGTGCACTCGACGCTGTTCGGGCCGGTCAAATACGCCT
ACCTGCCGCAGCACCTGCAACCGTCCGAACTGGTGGGCGGCAACGGCCTGGTGGAGATGGGCACCTTCGTCGCCATCCTG
CTCGGCACCATCGGCGGCGGCGAACTGGCCAACCTGACGCGCAACGGCGAGCTGGTCGGCCCGGCGCTGACCGGCATCGC
TTGCCTGGCGATCGCCGTCGGCGGCTGGCTGACGGCGCGCGGCGTGCCCGTGTCTCCGGCCTCGCAGCCGGATCTGCGCA
TCAACTGGAACCCCGTCTCCGAGACCTGGCGCAACCTGAAGCTGGCCAGCAACCAGCGCGCGGTGTTCCTGAGCCTGCTC
GGCATCTCGTGGCTGTGGTTCGTCGGCGCGACCTTCCTGACCTCATTCTTCGCCTTTGCTCGCAACGTGCTCGGCGGCGA
TCAGAACGTGGTGACGCTGCTGCTGGCGGTGTTCTCGATCGGCATCGGCCTGGGCTCGGTGCTGTGCGAAAAACTCTCGG
GCCGCATGGTGGAGGTCGGCCTGGTGCCGTTCGGCTCGATCGGCATGACGGTGTTCGCGGTGGACCTGTACTTCGCCTCG
CATGCCGAGGCGCTGGTCGCGCACGATGCGCTGACGGGCGTGGCCGGCTTCCTGCAGAACCATCGCCACTGGCGCGTGCT
GGCCGACCTGTTCCTGCTGGCGATGTTCGGCGGCTTCTACAGCGTGCCGCTGTACGCGCTGATCCAGAGCCGCTGCGAGC
CGACGCACCGCGCGCGCATCATCGCCGCCAACAACATCCTCAACGCGCTGTTCATGATCGCTTCGGCGGTGCTGGCGATG
GTGCTCACGCGCGCCGGCTTCACCATCCCGCAGCTGTTCCTGGTGACGGGCATCCTCAACGCCGTGGTGGCGATCTACAT
CTACACGCTGCTGCCGGAATTCCTGATCCGCTTCGTGATGTGGCTGCTGATCCATACCGTCTACCGCGTCAAGGTGGAGG
GCGACGAGCGGATTCCCGACGAGGGCCCGTGCCTGCTGGTCTGCAACCATGTCAGCTTTGTCGACGCGGTGGTGGTGGGG
GCCTTCGTGCGCCGGCCGGTGCGCTTCGTGATGGACCACCGCATCTTCCGCGTGCCGCTGCTGTCCTGGTTCTTCCGCAC
GATCAAGGCGATCCCCATCGCGCCGGCGCACGAAGACGAGGCGCTGCTCAAGCGCGCCTACGACGCCATCGCCGCCGCGC
TGGCCGAGGGCGAGGTGGTCTGCATCTTCCCCGAGGGCAAGATCACGGCCACCGGCGAGATGAATCCGTTCAAGGACGGC
GTGCGCCGCATCGTCGAGCGCACCCCGGTGCAGGTGGTGCCGATGGCGCTGCGCGGCCTGTGGGGCAGCTTCTTCTCGCG
CAAGGATGGCGCGGCGATGACGCGCCCGTTCCGCCGCGGCTTCCTCAACCGGCTGGAGCTGTGCATCGGCACGCCGGTGG
CACCGCAGGCGGTGTCGCCGGAAGGGCTGCAGGCCGCTGTGCTGGCCCTGCGCGGCGAGCGGCGCTAG

Upstream 100 bases:

>100_bases
GATCGGCTCTTGACGCCGCCGGGAGCGCCGGTATCCCGAGTCCCCGAAACCCGCCCGCACTGCGAGCGGGTTTTTTGTTG
AATCCCGATTTGTCCGCCAG

Downstream 100 bases:

>100_bases
CCGCGGCGCAATTGGATACACTGCCGGCTGGCAACGCGGCGGGTCAAGCGGCCCGCCACCTGAAACCCTGATTCCCAACC
CCGTTCGTCATACGCCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 635; Mature: 634

Protein sequence:

>635_residues
MSQSSQFSLLKQRRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLISAIFIAPFVLLSATSGQIADR
MDKARLIRLVKTLEIAIMAIGCAGFALRRVELLYLCTFLMGVHSTLFGPVKYAYLPQHLQPSELVGGNGLVEMGTFVAIL
LGTIGGGELANLTRNGELVGPALTGIACLAIAVGGWLTARGVPVSPASQPDLRINWNPVSETWRNLKLASNQRAVFLSLL
GISWLWFVGATFLTSFFAFARNVLGGDQNVVTLLLAVFSIGIGLGSVLCEKLSGRMVEVGLVPFGSIGMTVFAVDLYFAS
HAEALVAHDALTGVAGFLQNHRHWRVLADLFLLAMFGGFYSVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAM
VLTRAGFTIPQLFLVTGILNAVVAIYIYTLLPEFLIRFVMWLLIHTVYRVKVEGDERIPDEGPCLLVCNHVSFVDAVVVG
AFVRRPVRFVMDHRIFRVPLLSWFFRTIKAIPIAPAHEDEALLKRAYDAIAAALAEGEVVCIFPEGKITATGEMNPFKDG
VRRIVERTPVQVVPMALRGLWGSFFSRKDGAAMTRPFRRGFLNRLELCIGTPVAPQAVSPEGLQAAVLALRGERR

Sequences:

>Translated_635_residues
MSQSSQFSLLKQRRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLISAIFIAPFVLLSATSGQIADR
MDKARLIRLVKTLEIAIMAIGCAGFALRRVELLYLCTFLMGVHSTLFGPVKYAYLPQHLQPSELVGGNGLVEMGTFVAIL
LGTIGGGELANLTRNGELVGPALTGIACLAIAVGGWLTARGVPVSPASQPDLRINWNPVSETWRNLKLASNQRAVFLSLL
GISWLWFVGATFLTSFFAFARNVLGGDQNVVTLLLAVFSIGIGLGSVLCEKLSGRMVEVGLVPFGSIGMTVFAVDLYFAS
HAEALVAHDALTGVAGFLQNHRHWRVLADLFLLAMFGGFYSVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAM
VLTRAGFTIPQLFLVTGILNAVVAIYIYTLLPEFLIRFVMWLLIHTVYRVKVEGDERIPDEGPCLLVCNHVSFVDAVVVG
AFVRRPVRFVMDHRIFRVPLLSWFFRTIKAIPIAPAHEDEALLKRAYDAIAAALAEGEVVCIFPEGKITATGEMNPFKDG
VRRIVERTPVQVVPMALRGLWGSFFSRKDGAAMTRPFRRGFLNRLELCIGTPVAPQAVSPEGLQAAVLALRGERR
>Mature_634_residues
SQSSQFSLLKQRRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLISAIFIAPFVLLSATSGQIADRM
DKARLIRLVKTLEIAIMAIGCAGFALRRVELLYLCTFLMGVHSTLFGPVKYAYLPQHLQPSELVGGNGLVEMGTFVAILL
GTIGGGELANLTRNGELVGPALTGIACLAIAVGGWLTARGVPVSPASQPDLRINWNPVSETWRNLKLASNQRAVFLSLLG
ISWLWFVGATFLTSFFAFARNVLGGDQNVVTLLLAVFSIGIGLGSVLCEKLSGRMVEVGLVPFGSIGMTVFAVDLYFASH
AEALVAHDALTGVAGFLQNHRHWRVLADLFLLAMFGGFYSVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAMV
LTRAGFTIPQLFLVTGILNAVVAIYIYTLLPEFLIRFVMWLLIHTVYRVKVEGDERIPDEGPCLLVCNHVSFVDAVVVGA
FVRRPVRFVMDHRIFRVPLLSWFFRTIKAIPIAPAHEDEALLKRAYDAIAAALAEGEVVCIFPEGKITATGEMNPFKDGV
RRIVERTPVQVVPMALRGLWGSFFSRKDGAAMTRPFRRGFLNRLELCIGTPVAPQAVSPEGLQAAVLALRGERR

Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]

Homologues:

Organism=Escherichia coli, GI1789200, Length=378, Percent_Identity=28.3068783068783, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1789201, Length=180, Percent_Identity=30, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 69347; Mature: 69215

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSSQFSLLKQRRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLIS
CCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AIFIAPFVLLSATSGQIADRMDKARLIRLVKTLEIAIMAIGCAGFALRRVELLYLCTFLM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVHSTLFGPVKYAYLPQHLQPSELVGGNGLVEMGTFVAILLGTIGGGELANLTRNGELVG
HHHHHHHCCHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC
PALTGIACLAIAVGGWLTARGVPVSPASQPDLRINWNPVSETWRNLKLASNQRAVFLSLL
HHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHH
GISWLWFVGATFLTSFFAFARNVLGGDQNVVTLLLAVFSIGIGLGSVLCEKLSGRMVEVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LVPFGSIGMTVFAVDLYFASHAEALVAHDALTGVAGFLQNHRHWRVLADLFLLAMFGGFY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAMVLTRAGFTIPQLFLVTGILN
HHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AVVAIYIYTLLPEFLIRFVMWLLIHTVYRVKVEGDERIPDEGPCLLVCNHVSFVDAVVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
AFVRRPVRFVMDHRIFRVPLLSWFFRTIKAIPIAPAHEDEALLKRAYDAIAAALAEGEVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
CIFPEGKITATGEMNPFKDGVRRIVERTPVQVVPMALRGLWGSFFSRKDGAAMTRPFRRG
EEECCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FLNRLELCIGTPVAPQAVSPEGLQAAVLALRGERR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
SQSSQFSLLKQRRFAPFFWTQFLGAMNDNVFKVAFSSLVTYHAALFGNADPASAAFLIS
CCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
AIFIAPFVLLSATSGQIADRMDKARLIRLVKTLEIAIMAIGCAGFALRRVELLYLCTFLM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVHSTLFGPVKYAYLPQHLQPSELVGGNGLVEMGTFVAILLGTIGGGELANLTRNGELVG
HHHHHHHCCHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC
PALTGIACLAIAVGGWLTARGVPVSPASQPDLRINWNPVSETWRNLKLASNQRAVFLSLL
HHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCHHHHHHHH
GISWLWFVGATFLTSFFAFARNVLGGDQNVVTLLLAVFSIGIGLGSVLCEKLSGRMVEVG
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
LVPFGSIGMTVFAVDLYFASHAEALVAHDALTGVAGFLQNHRHWRVLADLFLLAMFGGFY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SVPLYALIQSRCEPTHRARIIAANNILNALFMIASAVLAMVLTRAGFTIPQLFLVTGILN
HHHHHHHHHHHCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
AVVAIYIYTLLPEFLIRFVMWLLIHTVYRVKVEGDERIPDEGPCLLVCNHVSFVDAVVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
AFVRRPVRFVMDHRIFRVPLLSWFFRTIKAIPIAPAHEDEALLKRAYDAIAAALAEGEVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
CIFPEGKITATGEMNPFKDGVRRIVERTPVQVVPMALRGLWGSFFSRKDGAAMTRPFRRG
EEECCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
FLNRLELCIGTPVAPQAVSPEGLQAAVLALRGERR
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA