| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is chrA1 [H]
Identifier: 17545698
GI number: 17545698
Start: 1030132
End: 1030713
Strand: Direct
Name: chrA1 [H]
Synonym: RSc0979
Alternate gene names: 17545698
Gene position: 1030132-1030713 (Clockwise)
Preceding gene: 17545697
Following gene: 17545699
Centisome position: 27.72
GC content: 69.76
Gene sequence:
>582_bases ATGGGCGAGCGCAACCCTCCCGCAGACGCGATGGCCGCCGGGCGCGCCGCGCCGGCGCCTTCGTGCACCAAGCTCTTCAC GGAGTTTGCGCGCATGGGGCTGTCGGGCTTCGGCGGCGTGCTGCCGTTCGCGCGGCGCGGCATCGTCGAGCGCAACGGCT GGCTGTCCGACGCCGAGTTCGCCGAGATGCTGAGCCTGGGCCAGGTGCTGCCGGGCCCCAACGTGGTGAATCTCTCCGTG ATGCTGGGCTACCGCTATCACGGCATCCGTGGCGCGGCGTCGGCGATGACCGGCCTGGTGGCGGTGCCCGCCGTGCTGCT GCTGTTGATCGTGATGCTGTACGACCACTACAGCGCACTGCCGCTGGTGCAGCAGTTGCTCAAGGGCATGGCGGCGGTGG CGGCGGGGCTGGTGCTCGCCACGGCGATCAAGCTGGCGCAGGGCCAGTCGCGCACACGGCGTGCGGCGTGGATCGGACTG GCGGTGTTCCTGTCCATCGGCTTGCTGCAATGGCCGCTGCTGCCGGTGATGGCGGTGCTGATTCCGCTGGCGCTCGTACT GGAATGGAGGGCGATGCAATGA
Upstream 100 bases:
>100_bases ACGCCGGCAAGCGCGCGCGCAAGGGCCGGGCGATCGAGCCCAAGCTGCGCGACCCGCAGCTGGCGTTGCCCAAGCCCGCA CCCGCCGCGGCCTGAGTCCG
Downstream 100 bases:
>100_bases GCACGCTCGCCACGCTGTTCGACCTGTTCTGGCATTTCACGGTGCTGTCGTTCCTCGCCATCGGCGGGGCCAGTTCGACG CTGCCCGACATGCACCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGERNPPADAMAAGRAAPAPSCTKLFTEFARMGLSGFGGVLPFARRGIVERNGWLSDAEFAEMLSLGQVLPGPNVVNLSV MLGYRYHGIRGAASAMTGLVAVPAVLLLLIVMLYDHYSALPLVQQLLKGMAAVAAGLVLATAIKLAQGQSRTRRAAWIGL AVFLSIGLLQWPLLPVMAVLIPLALVLEWRAMQ
Sequences:
>Translated_193_residues MGERNPPADAMAAGRAAPAPSCTKLFTEFARMGLSGFGGVLPFARRGIVERNGWLSDAEFAEMLSLGQVLPGPNVVNLSV MLGYRYHGIRGAASAMTGLVAVPAVLLLLIVMLYDHYSALPLVQQLLKGMAAVAAGLVLATAIKLAQGQSRTRRAAWIGL AVFLSIGLLQWPLLPVMAVLIPLALVLEWRAMQ >Mature_192_residues GERNPPADAMAAGRAAPAPSCTKLFTEFARMGLSGFGGVLPFARRGIVERNGWLSDAEFAEMLSLGQVLPGPNVVNLSVM LGYRYHGIRGAASAMTGLVAVPAVLLLLIVMLYDHYSALPLVQQLLKGMAAVAAGLVLATAIKLAQGQSRTRRAAWIGLA VFLSIGLLQWPLLPVMAVLIPLALVLEWRAMQ
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20490; Mature: 20359
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERNPPADAMAAGRAAPAPSCTKLFTEFARMGLSGFGGVLPFARRGIVERNGWLSDAEF CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHCHHHCCCCCCHHHH AEMLSLGQVLPGPNVVNLSVMLGYRYHGIRGAASAMTGLVAVPAVLLLLIVMLYDHYSAL HHHHHHHCCCCCCCEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH PLVQQLLKGMAAVAAGLVLATAIKLAQGQSRTRRAAWIGLAVFLSIGLLQWPLLPVMAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLALVLEWRAMQ HHHHHHHHHHCCC >Mature Secondary Structure GERNPPADAMAAGRAAPAPSCTKLFTEFARMGLSGFGGVLPFARRGIVERNGWLSDAEF CCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHCHHHCCCCCCHHHH AEMLSLGQVLPGPNVVNLSVMLGYRYHGIRGAASAMTGLVAVPAVLLLLIVMLYDHYSAL HHHHHHHCCCCCCCEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH PLVQQLLKGMAAVAAGLVLATAIKLAQGQSRTRRAAWIGLAVFLSIGLLQWPLLPVMAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPLALVLEWRAMQ HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]