| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545699
Identifier: 17545699
GI number: 17545699
Start: 1030695
End: 1031240
Strand: Direct
Name: 17545699
Synonym: RSc0980
Alternate gene names: NA
Gene position: 1030695-1031240 (Clockwise)
Preceding gene: 17545698
Following gene: 17545708
Centisome position: 27.73
GC content: 70.33
Gene sequence:
>546_bases ATGGAGGGCGATGCAATGAGCACGCTCGCCACGCTGTTCGACCTGTTCTGGCATTTCACGGTGCTGTCGTTCCTCGCCAT CGGCGGGGCCAGTTCGACGCTGCCCGACATGCACCGCTTCCTGGTCGACACGCGTCACTACATGACCAGCGAGCAGCTGA GCGCCATGTATGCCATCTCGCAGGCCGCGCCGGGGCCGAACGTGCTGTTCGTCGAGCTGTTCGGCTGGCAGGCCGCCGGC CTGGGCGGCGCGGTGGTCGCCATGCTCGGCATCTGCGGGCCGTCCTGCGTGATTGCCGGCATCGTCGCGCACGTCATGCA CCAGGCGCCGGACGCGCGCTGGGTGATGCTGATCCGCCGCGGGCTGGCACCGCTGACCATCGGGCTGCTGTTCTCCACCG GCTGGGTGCTGGCGCGCGCCACCGACCACAGTGTCGGCACCGTTGCGCTGACGGTGGCGACGGTGCTGGCGTGCGCCTTC ACGCGGGTGCATCCGCTGATCCTGGTGGCGGCCGGCGCGCTGGTGGGGGCGCTCGGCTGGGCGTAG
Upstream 100 bases:
>100_bases CGGCGTGGATCGGACTGGCGGTGTTCCTGTCCATCGGCTTGCTGCAATGGCCGCTGCTGCCGGTGATGGCGGTGCTGATT CCGCTGGCGCTCGTACTGGA
Downstream 100 bases:
>100_bases GGCGCCGCCGGACGATCTCGGAGGCCTCGCCATGAAAAAAAGCCGCTCGATGAGCGGCTTTTTCGTTGCGGCGCGGGCGG CCGGGCTAGTGCGCCATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; ChrA Half Sized-Like Protein; Chromate Transporter Family; Chromate Transporter ChrA; Subunit Of Chromate Transporter; CHR Transporter
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MEGDAMSTLATLFDLFWHFTVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPGPNVLFVELFGWQAAG LGGAVVAMLGICGPSCVIAGIVAHVMHQAPDARWVMLIRRGLAPLTIGLLFSTGWVLARATDHSVGTVALTVATVLACAF TRVHPLILVAAGALVGALGWA
Sequences:
>Translated_181_residues MEGDAMSTLATLFDLFWHFTVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPGPNVLFVELFGWQAAG LGGAVVAMLGICGPSCVIAGIVAHVMHQAPDARWVMLIRRGLAPLTIGLLFSTGWVLARATDHSVGTVALTVATVLACAF TRVHPLILVAAGALVGALGWA >Mature_181_residues MEGDAMSTLATLFDLFWHFTVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAISQAAPGPNVLFVELFGWQAAG LGGAVVAMLGICGPSCVIAGIVAHVMHQAPDARWVMLIRRGLAPLTIGLLFSTGWVLARATDHSVGTVALTVATVLACAF TRVHPLILVAAGALVGALGWA
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19005; Mature: 19005
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGDAMSTLATLFDLFWHFTVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAIS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAAPGPNVLFVELFGWQAAGLGGAVVAMLGICGPSCVIAGIVAHVMHQAPDARWVMLIRR HCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH GLAPLTIGLLFSTGWVLARATDHSVGTVALTVATVLACAFTRVHPLILVAAGALVGALGW CCHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure MEGDAMSTLATLFDLFWHFTVLSFLAIGGASSTLPDMHRFLVDTRHYMTSEQLSAMYAIS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QAAPGPNVLFVELFGWQAAGLGGAVVAMLGICGPSCVIAGIVAHVMHQAPDARWVMLIRR HCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHH GLAPLTIGLLFSTGWVLARATDHSVGTVALTVATVLACAFTRVHPLILVAAGALVGALGW CCHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA