| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545669
Identifier: 17545669
GI number: 17545669
Start: 998001
End: 999101
Strand: Direct
Name: 17545669
Synonym: RSc0950
Alternate gene names: NA
Gene position: 998001-999101 (Clockwise)
Preceding gene: 17545667
Following gene: 17545670
Centisome position: 26.85
GC content: 69.21
Gene sequence:
>1101_bases ATGGAGCCTTATGACAAGGCCGTATCGTCCCGTTTCACCCCACCGGGAGACACCATGCAGGGCACCAAGCCGTCCGCCGA TGCCTACGCCCGCCGGGCGCTGGCTCGCCTGATCCAGCACCAGCCGTCCGTCGATGCGACCGGCGCCGGCCTGGCGTTCT ACCAGCTCTTTGCCGAGGACGACGCGGCGCTGCGTGCCGAAGCCCAGGCCGGCCTGCTGGCGCCAGCCGCTCGTGTCAGC CCGAAGTTTTTCTACGATGCGCTCGGATCGCGGCTGTTCGAGGCCATTACTGATCTGCCCGAGTACTATCCGACCCGCAC CGAGGCCGCCATCTTCAGCCTGCACGCCGCCGAGATCGCGCTGCGCGTGGGGCGGGGCGCGACCCTGATCGACCTGGGCG CAGGCAATTGCCAGAAGGCTGCACGCCTGTTCCGGACCCTGGCGCCGGCATGCTACGTCGCGATCGACATCTCGGCGGAT TTCCTGCGCGGCACGCTGCGTGCGCTGGCCTGCCAGCATCCGCAACTGCCGATGGTCGGCATCGGCGCCGACCTGTGCGC GCCGCTGGCGCTGCCCGAGGCCGTCGGGCAAGGGCGCCGCGTCTGGTTCTATCCGGGGTCCAGCCTCGGTAACTTCACGC CGGACGAGGCGCTGTCATTCCTCGTTCGCCTGCGGGAGGCGTCGTCGCCGGGCGATTGCGTGCTGATCGGGGTCGACCTG ATCAAGGCGGCCGGCAGGCTGGAAGCCGCATACGACGACCCGCTCGGCGTGACAGCGGCGTTCAACCTGAACGTGCTGCG CAACCTGAACCGCCTGCTGGGCACGGATTTCGATGTGCGGGACTGGCGCCATGTGGCGCTGTATCGGGCGGAGGTGCATC GCATCGAGATGCACCTGGAGGCCCGGCGCGATCTGACGGTGCGCTGGGGCGAGCACGCGCGCGCCTTCGCCGCGGGCGAG CGGATGCATACCGAGAACTCCGTCAAGTACGACCTGCCGCGCCTGCGCGCGCTGTTCGAGGCGGCCGGCTTCGAAGCACT GCATGCCTGGACCGACGCCGACCAGGATTTCGCGGTCTGCCACGCCTGTGTCGGCCGGTAG
Upstream 100 bases:
>100_bases ATCGCCGGGCTCTCGGGTGAACGGACGGTAGCGGTGTCTCCGGGCGGCGTCTACGCTACACATTCGCCAGTGCGAAGGCG GTGGCACATTTTTCGCTGCC
Downstream 100 bases:
>100_bases AGGCCCACGCCGTCGGGCGGGAAGAGGCGGTGGACCGGTGCGATAATGAAACGGTCCCCGCTTGCCAGAGGTCGCCGCGA TGGCCGAATTCTTTATGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: S-Adenosyl-L-Methionine-Dependent Methyltransferase; S-Adenosyl-L-Methionine-Dependentmethyltransferase; Methyltransferase Type; Conserved Protein; Conserved Domain Protein
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MEPYDKAVSSRFTPPGDTMQGTKPSADAYARRALARLIQHQPSVDATGAGLAFYQLFAEDDAALRAEAQAGLLAPAARVS PKFFYDALGSRLFEAITDLPEYYPTRTEAAIFSLHAAEIALRVGRGATLIDLGAGNCQKAARLFRTLAPACYVAIDISAD FLRGTLRALACQHPQLPMVGIGADLCAPLALPEAVGQGRRVWFYPGSSLGNFTPDEALSFLVRLREASSPGDCVLIGVDL IKAAGRLEAAYDDPLGVTAAFNLNVLRNLNRLLGTDFDVRDWRHVALYRAEVHRIEMHLEARRDLTVRWGEHARAFAAGE RMHTENSVKYDLPRLRALFEAAGFEALHAWTDADQDFAVCHACVGR
Sequences:
>Translated_366_residues MEPYDKAVSSRFTPPGDTMQGTKPSADAYARRALARLIQHQPSVDATGAGLAFYQLFAEDDAALRAEAQAGLLAPAARVS PKFFYDALGSRLFEAITDLPEYYPTRTEAAIFSLHAAEIALRVGRGATLIDLGAGNCQKAARLFRTLAPACYVAIDISAD FLRGTLRALACQHPQLPMVGIGADLCAPLALPEAVGQGRRVWFYPGSSLGNFTPDEALSFLVRLREASSPGDCVLIGVDL IKAAGRLEAAYDDPLGVTAAFNLNVLRNLNRLLGTDFDVRDWRHVALYRAEVHRIEMHLEARRDLTVRWGEHARAFAAGE RMHTENSVKYDLPRLRALFEAAGFEALHAWTDADQDFAVCHACVGR >Mature_366_residues MEPYDKAVSSRFTPPGDTMQGTKPSADAYARRALARLIQHQPSVDATGAGLAFYQLFAEDDAALRAEAQAGLLAPAARVS PKFFYDALGSRLFEAITDLPEYYPTRTEAAIFSLHAAEIALRVGRGATLIDLGAGNCQKAARLFRTLAPACYVAIDISAD FLRGTLRALACQHPQLPMVGIGADLCAPLALPEAVGQGRRVWFYPGSSLGNFTPDEALSFLVRLREASSPGDCVLIGVDL IKAAGRLEAAYDDPLGVTAAFNLNVLRNLNRLLGTDFDVRDWRHVALYRAEVHRIEMHLEARRDLTVRWGEHARAFAAGE RMHTENSVKYDLPRLRALFEAAGFEALHAWTDADQDFAVCHACVGR
Specific function: Unknown
COG id: COG4301
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39956; Mature: 39956
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPYDKAVSSRFTPPGDTMQGTKPSADAYARRALARLIQHQPSVDATGAGLAFYQLFAED CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC DAALRAEAQAGLLAPAARVSPKFFYDALGSRLFEAITDLPEYYPTRTEAAIFSLHAAEIA CHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRVGRGATLIDLGAGNCQKAARLFRTLAPACYVAIDISADFLRGTLRALACQHPQLPMVG HHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEE IGADLCAPLALPEAVGQGRRVWFYPGSSLGNFTPDEALSFLVRLREASSPGDCVLIGVDL CCHHHHHHHHCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHH IKAAGRLEAAYDDPLGVTAAFNLNVLRNLNRLLGTDFDVRDWRHVALYRAEVHRIEMHLE HHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARRDLTVRWGEHARAFAAGERMHTENSVKYDLPRLRALFEAAGFEALHAWTDADQDFAVC HCCCEEEEECCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCHHHHH HACVGR HHHHCC >Mature Secondary Structure MEPYDKAVSSRFTPPGDTMQGTKPSADAYARRALARLIQHQPSVDATGAGLAFYQLFAED CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC DAALRAEAQAGLLAPAARVSPKFFYDALGSRLFEAITDLPEYYPTRTEAAIFSLHAAEIA CHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LRVGRGATLIDLGAGNCQKAARLFRTLAPACYVAIDISADFLRGTLRALACQHPQLPMVG HHCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEE IGADLCAPLALPEAVGQGRRVWFYPGSSLGNFTPDEALSFLVRLREASSPGDCVLIGVDL CCHHHHHHHHCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHH IKAAGRLEAAYDDPLGVTAAFNLNVLRNLNRLLGTDFDVRDWRHVALYRAEVHRIEMHLE HHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ARRDLTVRWGEHARAFAAGERMHTENSVKYDLPRLRALFEAAGFEALHAWTDADQDFAVC HCCCEEEEECCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHCCCCCHHHHH HACVGR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA