Click here to switch to the map view.

The map label for this gene is 17545152

Identifier: 17545152

GI number: 17545152

Start: 461921

End: 462577

Strand: Reverse

Name: 17545152

Synonym: RSc0433

Alternate gene names: NA

Gene position: 462577-461921 (Counterclockwise)

Preceding gene: 17545156

Following gene: 17545151

Centisome position: 12.45

GC content: 72.45

Gene sequence:

>657_bases
ATGGGCGCGCTGACCCGCATCGCGCGCGGCGCGGCCGGGGTCCTCGCCGTTGCCGCTTACCAGATCGGCGCGCACCACGC
GGCGGCGACGCCGGGTGCGCACGGCTTCGGCCTTGCCATGGCGATCGTGCCGCTGCTGGCGATCGCGCTGGCCGCGGCGC
TGCGATCGGCGCATCGCGCCTGGCTGCTGCCGCTGTGGGCGCTCGCCTGCGCGGCACTGTGGCTGGCGCGTGCACCGCTG
GCGCGCCATTTCGAATGGGGCTTGTATCTCGAGCACGTCAGCTTCAACCTGATGATGGCGTTCGTGTTCGGCCGCACGCT
CGCGGCCGGCCGCACGCCGCTGTGCACGCAGTTCGCGGCCATCGTCCACGGCACGCTCGCACCGGAGGTGGCGCGCTACA
CGCGGCAGATCACGGCGGCCTGGACGCTGTTCTTCCTGGGGATGGCCGCGGTCTCCACGCTGCTGTTCGCCGCGTCGCCG
ATCGTGACGTGGTCCACCTTCGCCAACTACCTGACGCTGCCGCTGGCGGGCGCGATGTTCGTCGCCGAATATGCGTGCCG
GCGCCTCGTGCTGCCGCCCGCGCAACGCACCGGCCTCCTGGAGTCGGTGCGGGCCTACCGGCAGTCGATGCACGCCAGGG
CAGGCCAGACCCGATGA

Upstream 100 bases:

>100_bases
GATCCCCGCAAGTCCGCCCCGCCCCATGTCGCCCGCCCCGCGCCGGCCGGGACATGATGCCGGGGTGCGCGCGTCGGCAA
GACCCGCCCGGGAGCGGACG

Downstream 100 bases:

>100_bases
ATCCACCGTCCGCGCGATGCGGTACCGCCGCGCCGCTCGACCTGTCGCTACTGTATTGATCCACGCCATGCAGACCTATC
CGCTGGTGTTCCATGCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Ketosynthase

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MGALTRIARGAAGVLAVAAYQIGAHHAAATPGAHGFGLAMAIVPLLAIALAAALRSAHRAWLLPLWALACAALWLARAPL
ARHFEWGLYLEHVSFNLMMAFVFGRTLAAGRTPLCTQFAAIVHGTLAPEVARYTRQITAAWTLFFLGMAAVSTLLFAASP
IVTWSTFANYLTLPLAGAMFVAEYACRRLVLPPAQRTGLLESVRAYRQSMHARAGQTR

Sequences:

>Translated_218_residues
MGALTRIARGAAGVLAVAAYQIGAHHAAATPGAHGFGLAMAIVPLLAIALAAALRSAHRAWLLPLWALACAALWLARAPL
ARHFEWGLYLEHVSFNLMMAFVFGRTLAAGRTPLCTQFAAIVHGTLAPEVARYTRQITAAWTLFFLGMAAVSTLLFAASP
IVTWSTFANYLTLPLAGAMFVAEYACRRLVLPPAQRTGLLESVRAYRQSMHARAGQTR
>Mature_217_residues
GALTRIARGAAGVLAVAAYQIGAHHAAATPGAHGFGLAMAIVPLLAIALAAALRSAHRAWLLPLWALACAALWLARAPLA
RHFEWGLYLEHVSFNLMMAFVFGRTLAAGRTPLCTQFAAIVHGTLAPEVARYTRQITAAWTLFFLGMAAVSTLLFAASPI
VTWSTFANYLTLPLAGAMFVAEYACRRLVLPPAQRTGLLESVRAYRQSMHARAGQTR

Specific function: Unknown

COG id: COG4648

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23353; Mature: 23222

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGALTRIARGAAGVLAVAAYQIGAHHAAATPGAHGFGLAMAIVPLLAIALAAALRSAHRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLPLWALACAALWLARAPLARHFEWGLYLEHVSFNLMMAFVFGRTLAAGRTPLCTQFAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IVHGTLAPEVARYTRQITAAWTLFFLGMAAVSTLLFAASPIVTWSTFANYLTLPLAGAMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VAEYACRRLVLPPAQRTGLLESVRAYRQSMHARAGQTR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GALTRIARGAAGVLAVAAYQIGAHHAAATPGAHGFGLAMAIVPLLAIALAAALRSAHRA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLLPLWALACAALWLARAPLARHFEWGLYLEHVSFNLMMAFVFGRTLAAGRTPLCTQFAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IVHGTLAPEVARYTRQITAAWTLFFLGMAAVSTLLFAASPIVTWSTFANYLTLPLAGAMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VAEYACRRLVLPPAQRTGLLESVRAYRQSMHARAGQTR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA