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The map label for this gene is 17545156

Identifier: 17545156

GI number: 17545156

Start: 465294

End: 465707

Strand: Reverse

Name: 17545156

Synonym: RSc0437

Alternate gene names: NA

Gene position: 465707-465294 (Counterclockwise)

Preceding gene: 17545157

Following gene: 17545152

Centisome position: 12.53

GC content: 73.67

Gene sequence:

>414_bases
ATGGCCGTCCTCATTGCATGGGCAGCGGGGCTGCTGTTCGGTGCCGGACTCATGGTGTCGTGCATGGCCAGTCCGGCCAA
GGTGCTCGGCTTTCTCGATCTCGCCGGCCGCTGGGATCCGTCGCTGGCCTTCGTGATGGCCGGGGCGATCCTGGTCGGCG
CCATCGCGTTCTTCATCGCGCGGCGGCGCGGGCGTTCGCTGCTGGGGCTGCCGGTCCGGCTGCCGGCCGGCGCGGCGATC
ACGGCGCGGCTCGTGCTCGGCAGCGCGGCGTTCGGGATCGGCTGGGGGCTGGCGGGATTCTGCCCCGGTCCGGCGCTGGT
CGCGCTCGGGGCCGGCGCGCCGAAAGCCTGGGGCTTCGTCGCCGCCATGCTGGCGGGCATGGCGGTCTTCAGCGCGATGG
AACGGCGGCGCTAG

Upstream 100 bases:

>100_bases
CTGTCGCGCGGCTCGCTGCGCTCGCTGGTGGCCACCGCGACCTTCATGGCGGCGGGCGTTCTCACCGTCTTCGTGCAGCG
GCACGTGCTGGGAGGCTGAC

Downstream 100 bases:

>100_bases
ACACCGCGTCATCGCGTGCCCACCGAACCCGCCCGCGACGATCCCGCCGCGGGCTTGTGCTTGGCGCATGCCGGGGGCGC
CGGATACCGCGTCTGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAVLIAWAAGLLFGAGLMVSCMASPAKVLGFLDLAGRWDPSLAFVMAGAILVGAIAFFIARRRGRSLLGLPVRLPAGAAI
TARLVLGSAAFGIGWGLAGFCPGPALVALGAGAPKAWGFVAAMLAGMAVFSAMERRR

Sequences:

>Translated_137_residues
MAVLIAWAAGLLFGAGLMVSCMASPAKVLGFLDLAGRWDPSLAFVMAGAILVGAIAFFIARRRGRSLLGLPVRLPAGAAI
TARLVLGSAAFGIGWGLAGFCPGPALVALGAGAPKAWGFVAAMLAGMAVFSAMERRR
>Mature_136_residues
AVLIAWAAGLLFGAGLMVSCMASPAKVLGFLDLAGRWDPSLAFVMAGAILVGAIAFFIARRRGRSLLGLPVRLPAGAAIT
ARLVLGSAAFGIGWGLAGFCPGPALVALGAGAPKAWGFVAAMLAGMAVFSAMERRR

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 13858; Mature: 13727

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLIAWAAGLLFGAGLMVSCMASPAKVLGFLDLAGRWDPSLAFVMAGAILVGAIAFFIA
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRRGRSLLGLPVRLPAGAAITARLVLGSAAFGIGWGLAGFCPGPALVALGAGAPKAWGFV
HHCCCCEECCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHH
AAMLAGMAVFSAMERRR
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVLIAWAAGLLFGAGLMVSCMASPAKVLGFLDLAGRWDPSLAFVMAGAILVGAIAFFIA
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RRRGRSLLGLPVRLPAGAAITARLVLGSAAFGIGWGLAGFCPGPALVALGAGAPKAWGFV
HHCCCCEECCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHH
AAMLAGMAVFSAMERRR
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]