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The map label for this gene is sufB [C]

Identifier: 17229984

GI number: 17229984

Start: 2991689

End: 2993128

Strand: Direct

Name: sufB [C]

Synonym: alr2492

Alternate gene names: 17229984

Gene position: 2991689-2993128 (Clockwise)

Preceding gene: 17229981

Following gene: 17229985

Centisome position: 46.64

GC content: 45.07

Gene sequence:

>1440_bases
ATGAGTGCCACTGTTAAAACCTTAGTCAACCAACCTTACAAGTACGGCTTTGTCACTGATATTGAAGCCGACACTATCCC
CCGTGGACTCGATGAAGATGTTGTCCGCTTGATTTCTACCAAGAAGAACGAACCGGAGTTCATGCTGGAATTTCGCCTCA
GAGCGTTCCGCCAGTGGCAAAAAATGACGGAACCAACTTGGCCAAGTGTCAAGTATCCGCCCATAGACTATCAGAATATC
ATCTATTACTCAGCGCCGAAACAAAAGAAGGCTAAACTCAACAGCTTGGACGAAGTTGACCCCACCCTCATAGAAACCTT
CGAGAAGCTGGGTATTCCCCTATCTGAACAAAAGCGTCTGGCAAATGTCGCCGTAGATGCGATTTTTGATAGCGTTTCTG
TCGCCACAACATTTAAAGAGAAGCTCGCCAAAGATGGCGTTATTTTCTGCTCAATTTCCGAAGCTTTACAAGAACATCCA
GAACTCATCAAGAAATACCTGGGTAGCGTTGTTCCCATTGCTGATAATTACTTTGCAGCCCTCAACGCAGCAGTATTTAG
CGATGGTTCTTTTGTCTATATTCCTAAAGGCGTAAAATGCCCAATGGAACTGTCTACCTACTTCCGCATCAACTCCGGTG
ATACGGGACAGTTTGAGCGGACTTTGATTGTCGCTGAAGAAGGTAGCTATGTTTCTTACCTCGAAGGTTGCACCGCACCT
ATGTACGACAGCAACCAACTCCACGCGGCTGTGGTGGAACTTGTGGCTTTAGATAACGCCGAGATTAAATATTCCACAGT
GCAGAACTGGTATGCTGGCGATGCTAACGGTAAAGGCGGGATTTATAACTTCGTTACCAAGCGCGGTTTGTGTCAAGGTG
TAAATTCTAAGATTTCTTGGACACAGGTGGAAACTGGTTCAGCAATTACTTGGAAGTATCCTAGTTGCGTATTGGTTGGT
GATAACTCCGTTGGTGAATTTTACTCGGTGGCGCTGACAAATAATATGCAGCAAGCCGATACCGGGACAAAGATGATTCA
TATCGGGAAGAACACCCGTAGCACAATTATTTCTAAAGGAATCTCTGCCGGTCAATCTAGTAATAGTTACCGGGGTTTGG
TGAAAATCAACCCGACAGCTAAAGGCGCACGGAACTATTCTCAGTGTGACTCTATGTTAATTGGCGATAATGCCCACGCT
AATACTTTCCCTTATATTCAAGTGCAGAATAATACGGGGAAGGTGGAGCATGAAGCTTCTACTTCCAAAATTGGGGAAGA
TCAGCTATTTTTCTTTGCTCAACGCGGTATTTCTTCGGAGGACGCTATTTCTATGATGATTAGCGGTTTCTGTAAGGATG
TGTTTAATCAGCTACCGATGGAGTTTGCGGTGGAGGCTGATAAGTTGTTGAGTCTGAAGTTGGAAGGTAGTGTGGGTTAG

Upstream 100 bases:

>100_bases
GTGTCACCACTCAGTAATATGAGATGAGATTCGGCTAGAACAAAGCCCGTCTCCCATCCTTATCAAGAGATTCAGTACCG
AACACGAGAGAACACTACCA

Downstream 100 bases:

>100_bases
GGTTTTTAACGCAGAGGGGCGCTGAGGTTGGCGCTGAGGTACGCGGAGAAGAGAAGAGAAGAGAAGAGAGAAGAGAGAGA
AGATGATTATTGAAAATAGT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSATVKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISTKKNEPEFMLEFRLRAFRQWQKMTEPTWPSVKYPPIDYQNI
IYYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHP
ELIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGSYVSYLEGCTAP
MYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVG
DNSVGEFYSVALTNNMQQADTGTKMIHIGKNTRSTIISKGISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAHA
NTFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG

Sequences:

>Translated_479_residues
MSATVKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISTKKNEPEFMLEFRLRAFRQWQKMTEPTWPSVKYPPIDYQNI
IYYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHP
ELIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGSYVSYLEGCTAP
MYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVG
DNSVGEFYSVALTNNMQQADTGTKMIHIGKNTRSTIISKGISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAHA
NTFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG
>Mature_478_residues
SATVKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISTKKNEPEFMLEFRLRAFRQWQKMTEPTWPSVKYPPIDYQNII
YYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPLSEQKRLANVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHPE
LIKKYLGSVVPIADNYFAALNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGSYVSYLEGCTAPM
YDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKISWTQVETGSAITWKYPSCVLVGD
NSVGEFYSVALTNNMQQADTGTKMIHIGKNTRSTIISKGISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAHAN
TFPYIQVQNNTGKVEHEASTSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=489, Percent_Identity=64.4171779141104, Blast_Score=659, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52931; Mature: 52799

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATVKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISTKKNEPEFMLEFRLRAFRQWQ
CCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KMTEPTWPSVKYPPIDYQNIIYYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPLSEQKRL
HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH
ANVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHPELIKKYLGSVVPIADNYFAA
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGSYVSYLEGCTAP
HHHHEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHCCCCC
MYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKISW
CCCCCCHHHHHHHHHHCCCCCEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEE
TQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADTGTKMIHIGKNTRSTIISKG
EEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCHHHHHHHC
ISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAHANTFPYIQVQNNTGKVEHEAS
CCCCCCCCCCEEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCEEEEECCCCCEEECCC
TSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC
>Mature Secondary Structure 
SATVKTLVNQPYKYGFVTDIEADTIPRGLDEDVVRLISTKKNEPEFMLEFRLRAFRQWQ
CCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KMTEPTWPSVKYPPIDYQNIIYYSAPKQKKAKLNSLDEVDPTLIETFEKLGIPLSEQKRL
HHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHH
ANVAVDAIFDSVSVATTFKEKLAKDGVIFCSISEALQEHPELIKKYLGSVVPIADNYFAA
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
LNAAVFSDGSFVYIPKGVKCPMELSTYFRINSGDTGQFERTLIVAEEGSYVSYLEGCTAP
HHHHEECCCCEEEECCCCCCCCEEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHCCCCC
MYDSNQLHAAVVELVALDNAEIKYSTVQNWYAGDANGKGGIYNFVTKRGLCQGVNSKISW
CCCCCCHHHHHHHHHHCCCCCEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEE
TQVETGSAITWKYPSCVLVGDNSVGEFYSVALTNNMQQADTGTKMIHIGKNTRSTIISKG
EEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCHHHHHHHC
ISAGQSSNSYRGLVKINPTAKGARNYSQCDSMLIGDNAHANTFPYIQVQNNTGKVEHEAS
CCCCCCCCCCEEEEEECCCCCCCCCHHHHCCEEECCCCCCCCCCEEEEECCCCCEEECCC
TSKIGEDQLFFFAQRGISSEDAISMMISGFCKDVFNQLPMEFAVEADKLLSLKLEGSVG
HHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]