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The map label for this gene is 17228896

Identifier: 17228896

GI number: 17228896

Start: 1666999

End: 1667580

Strand: Direct

Name: 17228896

Synonym: alr1401

Alternate gene names: NA

Gene position: 1666999-1667580 (Clockwise)

Preceding gene: 17228895

Following gene: 17228898

Centisome position: 25.99

GC content: 39.86

Gene sequence:

>582_bases
ATGATTGCTCAACCTGAGACTAAGCGTTACACCATTGATGAGTATTTAGAACTGGAAATCGCTTCAGAAATACGCAACGA
ATATTGTGATGGAGAAATTATTCCTATGACTGGTGGGACACCCAACCACAACGATATTGCTGGAAATTTGTATATTTTGC
TGAAATCTGCCCTAAAAAGCAAAAACTACCGGATTTTCTATGTCGATCAGCGACTCTGGATTCCCGATGCAAATCTCTAT
ACTTACCCTGATGTAATGGTTTTGCCCAAACCCTTAGAACTTCAAACCGGATGCAAAGATACTGTGCTAAACCCTTGCTT
TATTGCTGAAGTCTTGTCTAAGTCCACCCAAAACTATGACCGTGGTGAGAAATTTGTTGCCTATCGTCAAATTCCTATCT
TCCAAGAATATCTGCTGATTGATCAATACCGGATACACGTTGAGCATCATATTAAAACAGCCCCTAATCAGTGGCTATTT
TCAGAATACGACGACCCCACTGTCACCCTTTCTTTAAGCACCTTTGAGTTGCAAATTCAAATTGCCGAACTTTACGAAAA
TATCGATTTTTCCAACGTTTGA

Upstream 100 bases:

>100_bases
AAACGGCTAAAACAGCAGTAGAACGAGCGATAGAGATGGATAAAGCGATCGCCATAACTTGGATAAACCAGCAACTAAAA
GCCTTGGAGGTCAACCGATC

Downstream 100 bases:

>100_bases
GTGAAATTGCTAAAACAGGAGATAGAAACTGATGAAGCAACAGCCACAACTTGGATAAAATAGCCACTTGACTATAGGTG
CTACTGAACCAGAAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MIAQPETKRYTIDEYLELEIASEIRNEYCDGEIIPMTGGTPNHNDIAGNLYILLKSALKSKNYRIFYVDQRLWIPDANLY
TYPDVMVLPKPLELQTGCKDTVLNPCFIAEVLSKSTQNYDRGEKFVAYRQIPIFQEYLLIDQYRIHVEHHIKTAPNQWLF
SEYDDPTVTLSLSTFELQIQIAELYENIDFSNV

Sequences:

>Translated_193_residues
MIAQPETKRYTIDEYLELEIASEIRNEYCDGEIIPMTGGTPNHNDIAGNLYILLKSALKSKNYRIFYVDQRLWIPDANLY
TYPDVMVLPKPLELQTGCKDTVLNPCFIAEVLSKSTQNYDRGEKFVAYRQIPIFQEYLLIDQYRIHVEHHIKTAPNQWLF
SEYDDPTVTLSLSTFELQIQIAELYENIDFSNV
>Mature_193_residues
MIAQPETKRYTIDEYLELEIASEIRNEYCDGEIIPMTGGTPNHNDIAGNLYILLKSALKSKNYRIFYVDQRLWIPDANLY
TYPDVMVLPKPLELQTGCKDTVLNPCFIAEVLSKSTQNYDRGEKFVAYRQIPIFQEYLLIDQYRIHVEHHIKTAPNQWLF
SEYDDPTVTLSLSTFELQIQIAELYENIDFSNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 slr1290 and sll0925 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 22540; Mature: 22540

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQPETKRYTIDEYLELEIASEIRNEYCDGEIIPMTGGTPNHNDIAGNLYILLKSALKS
CCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHEEHHHHCC
KNYRIFYVDQRLWIPDANLYTYPDVMVLPKPLELQTGCKDTVLNPCFIAEVLSKSTQNYD
CCCEEEEEECEEECCCCCCEECCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCC
RGEKFVAYRQIPIFQEYLLIDQYRIHVEHHIKTAPNQWLFSEYDDPTVTLSLSTFELQIQ
CCCEEEEEECCCHHHHHHHHHHEEEEEEEEEECCCCCCEECCCCCCEEEEEEEEEEEEEE
IAELYENIDFSNV
EHHHHCCCCCCCC
>Mature Secondary Structure
MIAQPETKRYTIDEYLELEIASEIRNEYCDGEIIPMTGGTPNHNDIAGNLYILLKSALKS
CCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHEEHHHHCC
KNYRIFYVDQRLWIPDANLYTYPDVMVLPKPLELQTGCKDTVLNPCFIAEVLSKSTQNYD
CCCEEEEEECEEECCCCCCEECCCEEEECCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCC
RGEKFVAYRQIPIFQEYLLIDQYRIHVEHHIKTAPNQWLFSEYDDPTVTLSLSTFELQIQ
CCCEEEEEECCCHHHHHHHHHHEEEEEEEEEECCCCCCEECCCCCCEEEEEEEEEEEEEE
IAELYENIDFSNV
EHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]