| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228895
Identifier: 17228895
GI number: 17228895
Start: 1666656
End: 1666898
Strand: Direct
Name: 17228895
Synonym: asr1400
Alternate gene names: NA
Gene position: 1666656-1666898 (Clockwise)
Preceding gene: 17228894
Following gene: 17228896
Centisome position: 25.99
GC content: 41.98
Gene sequence:
>243_bases TTGCCAGGAGATCAAATACCTGGGATTGGTTATACAGTCTTCAAGTTGAGAGTCCGAAATAGTGACACTCAAAAAGGTAA AAGCGGTGGCTATCGTTTAATTTACTACGTCAAAACAGCAACAGGAATCATTTTGCTGACCGTTTACACAAAATCTGAAC AAGTCGATATTGCCGCAGATGACATTCAGAGCATCATTGCAGACTATGAGCAACGGACGCTTACCGAGCAAGACAATAGC TAG
Upstream 100 bases:
>100_bases TTCGCCAACGTTTAAACGAAATATACGCACTCTTGCTAAGAAATATCGCAGTATTCGGAATGACATACAACCTGTTATCG AACAACTTGAGCAAGGAGAA
Downstream 100 bases:
>100_bases AAACGGCTAAAACAGCAGTAGAACGAGCGATAGAGATGGATAAAGCGATCGCCATAACTTGGATAAACCAGCAACTAAAA GCCTTGGAGGTCAACCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MPGDQIPGIGYTVFKLRVRNSDTQKGKSGGYRLIYYVKTATGIILLTVYTKSEQVDIAADDIQSIIADYEQRTLTEQDNS
Sequences:
>Translated_80_residues MPGDQIPGIGYTVFKLRVRNSDTQKGKSGGYRLIYYVKTATGIILLTVYTKSEQVDIAADDIQSIIADYEQRTLTEQDNS >Mature_79_residues PGDQIPGIGYTVFKLRVRNSDTQKGKSGGYRLIYYVKTATGIILLTVYTKSEQVDIAADDIQSIIADYEQRTLTEQDNS
Specific function: Unknown
COG id: COG2026
COG function: function code JD; Cytotoxic translational repressor of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8933; Mature: 8802
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGDQIPGIGYTVFKLRVRNSDTQKGKSGGYRLIYYVKTATGIILLTVYTKSEQVDIAAD CCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEHH DIQSIIADYEQRTLTEQDNS HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGDQIPGIGYTVFKLRVRNSDTQKGKSGGYRLIYYVKTATGIILLTVYTKSEQVDIAAD CCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEHH DIQSIIADYEQRTLTEQDNS HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA