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The map label for this gene is 17228819

Identifier: 17228819

GI number: 17228819

Start: 1572818

End: 1574170

Strand: Direct

Name: 17228819

Synonym: alr1324

Alternate gene names: NA

Gene position: 1572818-1574170 (Clockwise)

Preceding gene: 17228815

Following gene: 17228823

Centisome position: 24.52

GC content: 46.78

Gene sequence:

>1353_bases
ATGGGGCGTATTTTTATTTCGGCAGCCCACGGAGGCAGAGAAGCGGGAGGAGTAGATCCAGGCTCAATCGCGGGGGGAAC
GACGGAAGCTAGAGAGATGATTCTGTTACGAGATTTAATTGTGACAGAATTGCGATCGCGGAGTTTTGAAGTTTTGTCTG
TTCCCGATGATTTGAGTGCGGCTGATACTATCGCCTGGATCAATGCTCGTGGTCGTCGAGGTGATGTATCCCTAGAAGTC
CATGCTGATTCGGCGAGTAGTCCGGCTGTGCGGGGTGCTAGTGTGTTTTATATTGCCAGTAATAATGAGCGTAAAAGCAA
CGGGGAATTGCTGTTAGTTGGATTGTTACGCCGTGTACCCCAGTTACCAAATCGGGGTGTTAAACCAGATACAGACAGTG
GTTTGGGTAGATTAGCCTTTTGTCGGCAGATTGCGATCGCTTCTTTACTCATGCAGGTGGCTTTTCTCAGCAGTCCTGAG
GATCGGGCTTTGCTGCAAAATCGTCGGCGCGATTTCGCTTTGGGTATTGCTGATGGTTTGGCTTCATGGAGTCGAGTAAT
TGACCCTAACCCAGGAACTCCCGCAGACCCGAATTACCCACCCATCAATATTAATATTAACGGGCAGAATTATGCAGAGC
AAGGCATCTTAGTTAATGGTAACGCTTACATTCCCATTGATTTAGTCGATCGCCTGCGGATTGATTTATCAAAAGCACCG
AATGTCAATCGCATTACCTATCGGCGAATTGTCTATGTCAAAGCGGTGGAACTGCGAGATTTTAATGTAGCCGTTAGCTG
GGATGCAGCAACACGCACCGTCATCTTACGTTCCAATTTGGTAGTGTGTCCTGGTCAAATTGACAGAATCATGTCCAATG
GAACTACCTCAGAAGTGCAAATGCAACTATTCTTGAGAAACAATAACGAAAATGCCTTAGCCCAATTTCCTGACTTACCT
AAACTCTATCGAGAAGAAGCCAGCGCCGAGGGCGTAAATTATGACATTGCTTTCTGTCAAATGTGCGTAGAAACAGGATT
TTTGCGCTTTGGTGGGGATATTAAAGCAGAACAAAATAACTTTGCCGGTTTAGGTTCCATTGGTGGCGGTACAGAAGCAG
CAGCTTTTCCCAGTGCCAGGATCGGTGTCAGGGCGCACATCCAGCACCTCAAAGCCTACGCCAGTTTAGAACCCCTAGTC
AATGAAGTAGTAGATCCCAGATTTCGCTTTGTCACCCGTGGCGTGGCGACAAAAATTGATGAACTTTCAGGACGTTGGTC
AGCCGATTTAGATTATGGGTCAAAAATCACAGCTATGGTAAAACGTTTATACGAGTCCGCCGGTTTGTTTTAA

Upstream 100 bases:

>100_bases
TCAGTATATCTATTCCCACTCCCCATATAATGATTGTTGCCAAGCCAAAAATATTGTATAGAATTGCTTACGCTTAATTT
TATCAGAGGAAATACGGGAG

Downstream 100 bases:

>100_bases
TAGTGAATCCGGTCTAAGCAACGCCCAAAACTCTAACATTTTTGATATCTCATCCCTGGGAGTTGCGAAACTATACCCAT
CAATTCTAACTGTAATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MGRIFISAAHGGREAGGVDPGSIAGGTTEAREMILLRDLIVTELRSRSFEVLSVPDDLSAADTIAWINARGRRGDVSLEV
HADSASSPAVRGASVFYIASNNERKSNGELLLVGLLRRVPQLPNRGVKPDTDSGLGRLAFCRQIAIASLLMQVAFLSSPE
DRALLQNRRRDFALGIADGLASWSRVIDPNPGTPADPNYPPINININGQNYAEQGILVNGNAYIPIDLVDRLRIDLSKAP
NVNRITYRRIVYVKAVELRDFNVAVSWDAATRTVILRSNLVVCPGQIDRIMSNGTTSEVQMQLFLRNNNENALAQFPDLP
KLYREEASAEGVNYDIAFCQMCVETGFLRFGGDIKAEQNNFAGLGSIGGGTEAAAFPSARIGVRAHIQHLKAYASLEPLV
NEVVDPRFRFVTRGVATKIDELSGRWSADLDYGSKITAMVKRLYESAGLF

Sequences:

>Translated_450_residues
MGRIFISAAHGGREAGGVDPGSIAGGTTEAREMILLRDLIVTELRSRSFEVLSVPDDLSAADTIAWINARGRRGDVSLEV
HADSASSPAVRGASVFYIASNNERKSNGELLLVGLLRRVPQLPNRGVKPDTDSGLGRLAFCRQIAIASLLMQVAFLSSPE
DRALLQNRRRDFALGIADGLASWSRVIDPNPGTPADPNYPPINININGQNYAEQGILVNGNAYIPIDLVDRLRIDLSKAP
NVNRITYRRIVYVKAVELRDFNVAVSWDAATRTVILRSNLVVCPGQIDRIMSNGTTSEVQMQLFLRNNNENALAQFPDLP
KLYREEASAEGVNYDIAFCQMCVETGFLRFGGDIKAEQNNFAGLGSIGGGTEAAAFPSARIGVRAHIQHLKAYASLEPLV
NEVVDPRFRFVTRGVATKIDELSGRWSADLDYGSKITAMVKRLYESAGLF
>Mature_449_residues
GRIFISAAHGGREAGGVDPGSIAGGTTEAREMILLRDLIVTELRSRSFEVLSVPDDLSAADTIAWINARGRRGDVSLEVH
ADSASSPAVRGASVFYIASNNERKSNGELLLVGLLRRVPQLPNRGVKPDTDSGLGRLAFCRQIAIASLLMQVAFLSSPED
RALLQNRRRDFALGIADGLASWSRVIDPNPGTPADPNYPPINININGQNYAEQGILVNGNAYIPIDLVDRLRIDLSKAPN
VNRITYRRIVYVKAVELRDFNVAVSWDAATRTVILRSNLVVCPGQIDRIMSNGTTSEVQMQLFLRNNNENALAQFPDLPK
LYREEASAEGVNYDIAFCQMCVETGFLRFGGDIKAEQNNFAGLGSIGGGTEAAAFPSARIGVRAHIQHLKAYASLEPLVN
EVVDPRFRFVTRGVATKIDELSGRWSADLDYGSKITAMVKRLYESAGLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002901 [H]

Pfam domain/function: PF01832 Glucosaminidase [H]

EC number: NA

Molecular weight: Translated: 49060; Mature: 48929

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00318 HMG_COA_REDUCTASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIFISAAHGGREAGGVDPGSIAGGTTEAREMILLRDLIVTELRSRSFEVLSVPDDLSA
CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
ADTIAWINARGRRGDVSLEVHADSASSPAVRGASVFYIASNNERKSNGELLLVGLLRRVP
HHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHCC
QLPNRGVKPDTDSGLGRLAFCRQIAIASLLMQVAFLSSPEDRALLQNRRRDFALGIADGL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEHHHHH
ASWSRVIDPNPGTPADPNYPPINININGQNYAEQGILVNGNAYIPIDLVDRLRIDLSKAP
HHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHCCEEECCCEEEEHHHHHHHHHHHCCCC
NVNRITYRRIVYVKAVELRDFNVAVSWDAATRTVILRSNLVVCPGQIDRIMSNGTTSEVQ
CCCEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEEEECCEEECCCHHHHHHCCCCCCCEE
MQLFLRNNNENALAQFPDLPKLYREEASAEGVNYDIAFCQMCVETGFLRFGGDIKAEQNN
EEEEEEECCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEECCCEEECCCC
FAGLGSIGGGTEAAAFPSARIGVRAHIQHLKAYASLEPLVNEVVDPRFRFVTRGVATKID
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ELSGRWSADLDYGSKITAMVKRLYESAGLF
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRIFISAAHGGREAGGVDPGSIAGGTTEAREMILLRDLIVTELRSRSFEVLSVPDDLSA
CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
ADTIAWINARGRRGDVSLEVHADSASSPAVRGASVFYIASNNERKSNGELLLVGLLRRVP
HHEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEHHHHHCC
QLPNRGVKPDTDSGLGRLAFCRQIAIASLLMQVAFLSSPEDRALLQNRRRDFALGIADGL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEHHHHH
ASWSRVIDPNPGTPADPNYPPINININGQNYAEQGILVNGNAYIPIDLVDRLRIDLSKAP
HHHHHCCCCCCCCCCCCCCCEEEEEECCCCHHHCCEEECCCEEEEHHHHHHHHHHHCCCC
NVNRITYRRIVYVKAVELRDFNVAVSWDAATRTVILRSNLVVCPGQIDRIMSNGTTSEVQ
CCCEEEEEEEEEEEEEEEEEEEEEEEECCCEEEEEEECCEEECCCHHHHHHCCCCCCCEE
MQLFLRNNNENALAQFPDLPKLYREEASAEGVNYDIAFCQMCVETGFLRFGGDIKAEQNN
EEEEEEECCCCHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEECCCEEECCCC
FAGLGSIGGGTEAAAFPSARIGVRAHIQHLKAYASLEPLVNEVVDPRFRFVTRGVATKID
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ELSGRWSADLDYGSKITAMVKRLYESAGLF
HHCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]