Definition | Nostoc sp. PCC 7120, complete genome. |
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Accession | NC_003272 |
Length | 6,413,771 |
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The map label for this gene is 17228823
Identifier: 17228823
GI number: 17228823
Start: 1577189
End: 1577344
Strand: Direct
Name: 17228823
Synonym: asr1328
Alternate gene names: NA
Gene position: 1577189-1577344 (Clockwise)
Preceding gene: 17228819
Following gene: 17228824
Centisome position: 24.59
GC content: 39.74
Gene sequence:
>156_bases ATGAGCCAAACTAGATTTAAGGCGAATAGCACTGCCAAGGAAGTACACAGACAAAATATTCAAAGAAACATACAGCACCG TCTAGACGTAGCTAGAGCCAAAGGTGATGAAAGACTAATTCGGCAACTAGAAGCTGAATTAAGACAATTTGCCTAA
Upstream 100 bases:
>100_bases ATATCTATATTAAATTAATTTTTTCTGTAACATACACTACGAAACTTATGCTATGTTAGGAAGAACAGACATAAAGCAGA AAAATTAAGAGGTTAATCCT
Downstream 100 bases:
>100_bases ATTTCAGGACTCATTGTTCATAGTTTTGTTGTGTTCATCCCGCTCAGGCGGGTTTTTTATTGGAGACTCAGGTTAACCAT TAATATTCCTCCTTTCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MSQTRFKANSTAKEVHRQNIQRNIQHRLDVARAKGDERLIRQLEAELRQFA
Sequences:
>Translated_51_residues MSQTRFKANSTAKEVHRQNIQRNIQHRLDVARAKGDERLIRQLEAELRQFA >Mature_50_residues SQTRFKANSTAKEVHRQNIQRNIQHRLDVARAKGDERLIRQLEAELRQFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6060; Mature: 5929
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTRFKANSTAKEVHRQNIQRNIQHRLDVARAKGDERLIRQLEAELRQFA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SQTRFKANSTAKEVHRQNIQRNIQHRLDVARAKGDERLIRQLEAELRQFA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA