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The map label for this gene is 17228815

Identifier: 17228815

GI number: 17228815

Start: 1566918

End: 1567319

Strand: Direct

Name: 17228815

Synonym: alr1320

Alternate gene names: NA

Gene position: 1566918-1567319 (Clockwise)

Preceding gene: 17228810

Following gene: 17228819

Centisome position: 24.43

GC content: 42.29

Gene sequence:

>402_bases
ATGGCTGATATTGTTGATATTGCGGTTAGTGCTGATAGTTTTAAAACTCTGGTGACAGCTGTACAAGCTGCTGGTTTAGT
AGAAACTTTAAAAAGTCCAGGCCCGTTTACTGTTTTTGCACCAAATGACGATGCTTTTGCTAAGTTACCCCCAGGAACCA
TACAAACTTTGGTGCAGAATATTCCCCAATTGACCAGGATATTAACGTACCATGTGGTACCTGGCAAGCTGAAGCAGGCT
GATTTGGCAAAACTCGGCACAGTGACATCGGTTGAAGGTTCACCGATTAAAATTGATTGTGCTGACGGTTTTGAAGTGAA
AAATGCCACAGTTTTAGCCGCAGATATCGAAGCGGATAACGGTATCATTCACGTCATAGACACTGTAATATTGATGGGTT
GA

Upstream 100 bases:

>100_bases
TTATGGATTATCTTAATATCATGTTTTTAAACAAACTTTGTGATAAAAATTAAAACAGTTTTATAATTTAAAATTCTTGG
CAGAGATTGAGGCGAAACAG

Downstream 100 bases:

>100_bases
TTTTCCCTTAGGTGGGCATTACCCACCTAATTACTTAAACTTTGGAAAAAGCCGGCGGATAAATAACTTTTCCTTGATAT
TTTTCTTGATAACTTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MADIVDIAVSADSFKTLVTAVQAAGLVETLKSPGPFTVFAPNDDAFAKLPPGTIQTLVQNIPQLTRILTYHVVPGKLKQA
DLAKLGTVTSVEGSPIKIDCADGFEVKNATVLAADIEADNGIIHVIDTVILMG

Sequences:

>Translated_133_residues
MADIVDIAVSADSFKTLVTAVQAAGLVETLKSPGPFTVFAPNDDAFAKLPPGTIQTLVQNIPQLTRILTYHVVPGKLKQA
DLAKLGTVTSVEGSPIKIDCADGFEVKNATVLAADIEADNGIIHVIDTVILMG
>Mature_132_residues
ADIVDIAVSADSFKTLVTAVQAAGLVETLKSPGPFTVFAPNDDAFAKLPPGTIQTLVQNIPQLTRILTYHVVPGKLKQAD
LAKLGTVTSVEGSPIKIDCADGFEVKNATVLAADIEADNGIIHVIDTVILMG

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain [H]

Homologues:

Organism=Homo sapiens, GI4507467, Length=131, Percent_Identity=34.3511450381679, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000782 [H]

Pfam domain/function: PF02469 Fasciclin [H]

EC number: NA

Molecular weight: Translated: 13897; Mature: 13766

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIVDIAVSADSFKTLVTAVQAAGLVETLKSPGPFTVFAPNDDAFAKLPPGTIQTLVQN
CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHHH
IPQLTRILTYHVVPGKLKQADLAKLGTVTSVEGSPIKIDCADGFEVKNATVLAADIEADN
HHHHHHHHHHCCCCCCCCHHHHHHHCCEEECCCCCEEEECCCCCEECCEEEEEEECCCCC
GIIHVIDTVILMG
CEEEEEHHHHHCC
>Mature Secondary Structure 
ADIVDIAVSADSFKTLVTAVQAAGLVETLKSPGPFTVFAPNDDAFAKLPPGTIQTLVQN
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHHH
IPQLTRILTYHVVPGKLKQADLAKLGTVTSVEGSPIKIDCADGFEVKNATVLAADIEADN
HHHHHHHHHHCCCCCCCCHHHHHHHCCEEECCCCCEEEECCCCCEECCEEEEEEECCCCC
GIIHVIDTVILMG
CEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]