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The map label for this gene is 17228562

Identifier: 17228562

GI number: 17228562

Start: 1243775

End: 1244212

Strand: Direct

Name: 17228562

Synonym: alr1067

Alternate gene names: NA

Gene position: 1243775-1244212 (Clockwise)

Preceding gene: 17228559

Following gene: 17228568

Centisome position: 19.39

GC content: 43.84

Gene sequence:

>438_bases
ATGAATAAAATATTGTTCTTGTGTACAGGTAACTACTACCGCAGTCGCTTTGCCGAACACCTATTCAATCAGTTGGCTAC
CAAACAAGGGTTAGATTGGCAAGCTGATTCCAGAGGATTAGCACTTGAACGGGGTGTAAATAATGTGGGGGCAATTTCCC
AATACGCGGCTGAGGCTCTAGCAGCGCGTTTAGTAAATATATCTGATGATGAACGGTTTCCTAAGCCAGCCTGTGAGCCA
GATTTTCAATCAGCTACCAGGGTTATTGCCCTAGATGAATCAGAACACCGTCCACTAATGAATGAGCGCTTTCCTCAATG
GGTTGATGCAATTGAATACTGGCTAGTTCACGACATCGATAAAACCTCTGCAACCGCAGCCCTTGGGCAAATTGAGAAAC
ATCTACTGCAACTTATAGAACAATTAGCTCAAAGTTAG

Upstream 100 bases:

>100_bases
CGTCTGCCTTCTGCCTTGTCCCAACCAAGATCACCAAAAGTTGCCAAGAACCCATTTACCAGTACAAAGCCTGTAGGTTT
AGTCAAAATCACGTAGTCAA

Downstream 100 bases:

>100_bases
TCACTCTGCGATCGCCCTCAGAAAATTATACCTCTTCTTCAAACTGTGAGTAACCGATTTAAATAGTCTTTTGCTGAATT
AATTAAACTTTCAATATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein-Tyrosine-Phosphatase; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Protein-Tyrosine Phosphatase Low Molecular Weight

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNKILFLCTGNYYRSRFAEHLFNQLATKQGLDWQADSRGLALERGVNNVGAISQYAAEALAARLVNISDDERFPKPACEP
DFQSATRVIALDESEHRPLMNERFPQWVDAIEYWLVHDIDKTSATAALGQIEKHLLQLIEQLAQS

Sequences:

>Translated_145_residues
MNKILFLCTGNYYRSRFAEHLFNQLATKQGLDWQADSRGLALERGVNNVGAISQYAAEALAARLVNISDDERFPKPACEP
DFQSATRVIALDESEHRPLMNERFPQWVDAIEYWLVHDIDKTSATAALGQIEKHLLQLIEQLAQS
>Mature_145_residues
MNKILFLCTGNYYRSRFAEHLFNQLATKQGLDWQADSRGLALERGVNNVGAISQYAAEALAARLVNISDDERFPKPACEP
DFQSATRVIALDESEHRPLMNERFPQWVDAIEYWLVHDIDKTSATAALGQIEKHLLQLIEQLAQS

Specific function: Unknown

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16446; Mature: 16446

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKILFLCTGNYYRSRFAEHLFNQLATKQGLDWQADSRGLALERGVNNVGAISQYAAEAL
CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
AARLVNISDDERFPKPACEPDFQSATRVIALDESEHRPLMNERFPQWVDAIEYWLVHDID
HHHHHCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCC
KTSATAALGQIEKHLLQLIEQLAQS
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKILFLCTGNYYRSRFAEHLFNQLATKQGLDWQADSRGLALERGVNNVGAISQYAAEAL
CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH
AARLVNISDDERFPKPACEPDFQSATRVIALDESEHRPLMNERFPQWVDAIEYWLVHDID
HHHHHCCCCCCCCCCCCCCCCCHHCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHCCC
KTSATAALGQIEKHLLQLIEQLAQS
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA