Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17228559

Identifier: 17228559

GI number: 17228559

Start: 1242298

End: 1242498

Strand: Direct

Name: 17228559

Synonym: asr1064

Alternate gene names: NA

Gene position: 1242298-1242498 (Clockwise)

Preceding gene: 17228558

Following gene: 17228562

Centisome position: 19.37

GC content: 39.8

Gene sequence:

>201_bases
GTGGCTGAAGAAATTGAAGATGAAAATGTAAGAAAAAATATATTACGCCTAATGTGTATTAAAGACGAAAACCCTACATT
TATCGTTGTAGAGACGTTGCATTGCAAAGTCTCTACCGCACTTAGCTTGAAATTCGACTCTGGGGTGGAATCGTTGACTC
ACTCGCATTCATCTCACGCCAAATCAAAGATTCTGGCGTGA

Upstream 100 bases:

>100_bases
AAATAATTAGGTTAAGTTTGTAGCCGAGTCAGGGGGGTGACTTCCTGGCTTAGGCATCCAAATAACAATTGCTAATAAAC
TGTCCGATAATGCAGAGTTT

Downstream 100 bases:

>100_bases
GGCTTCTGCTGCTTCAGCTAAATTGCTATCAAGCCATCAAGCCATAACTCATACCAATCTAAAAACGTTGCTGATGATTC
AAAAGTAGGTGGACCCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MAEEIEDENVRKNILRLMCIKDENPTFIVVETLHCKVSTALSLKFDSGVESLTHSHSSHAKSKILA

Sequences:

>Translated_66_residues
MAEEIEDENVRKNILRLMCIKDENPTFIVVETLHCKVSTALSLKFDSGVESLTHSHSSHAKSKILA
>Mature_65_residues
AEEIEDENVRKNILRLMCIKDENPTFIVVETLHCKVSTALSLKFDSGVESLTHSHSSHAKSKILA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7396; Mature: 7264

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEIEDENVRKNILRLMCIKDENPTFIVVETLHCKVSTALSLKFDSGVESLTHSHSSHA
CCCCCCCCHHHHHHHEEEEECCCCCCEEEEEECEEEEEEEEEEEECCCHHHHHHCCCCCC
KSKILA
HHCCCC
>Mature Secondary Structure 
AEEIEDENVRKNILRLMCIKDENPTFIVVETLHCKVSTALSLKFDSGVESLTHSHSSHA
CCCCCCCHHHHHHHEEEEECCCCCCEEEEEECEEEEEEEEEEEECCCHHHHHHCCCCCC
KSKILA
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA