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The map label for this gene is yhhW [C]

Identifier: 17228558

GI number: 17228558

Start: 1240822

End: 1241757

Strand: Direct

Name: yhhW [C]

Synonym: alr1063

Alternate gene names: 17228558

Gene position: 1240822-1241757 (Clockwise)

Preceding gene: 17228555

Following gene: 17228559

Centisome position: 19.35

GC content: 44.87

Gene sequence:

>936_bases
GTGGATCTACTTATAATGATTCCAGCATCCACCAATTACCCCCCACTACTTATGGCAATACTTCAATTGATTGAACCTGA
AGTTAAAGATTTGGGTGGGTTTGTTGCCCGCCGTAGTCTGCCATATCCACATCGCCAAATGGTCGGGCCATTTATATTTT
TTGATCATCTTGGCCCATCTGTTTTACCACCCAACAAAGGTATTGATGTACGACCACATCCTCATATCAATATTGCTACC
CTAACTTACTTATTCGATGGTTCTATAATGCACCGCGATAGTTTAGGTATCGTACAAGAGATTCAACCGGGTGCGGTGAA
CTGGATGACGGCGGGAAAGGGGATTGTACATTCAGAAAGATCGCCCGACTTTGACCGTCACAACGAAGCTAATATTCATG
GTATACAAACCTGGATTGCTTTGCCTGTTGAATACGAAGAAACTGAGCCTTGGTTCACTCATTATCCAGATGAAAACCTT
CCCACCTGGGACGAGAATAACGTTACCATCAAGCTTATTGCTGGAGAAGCACATGGTTATACCTCACCTGTAAAAGTTTT
TTCACCCATCCTCTATTTAGATGGGCTGCTATCTGCCAATGGTCACTTCACTATTCCTACTGGTTATTCAGAGAGAGCAG
TATACAGTGTTACAGAAGGACTGAGTATTAATGATCAACCTCTAGAGCCATATCGCCTCGCCATCCTAGAGTCAGGCCAC
GAGGTCAAGGTTTCTGCTACTGACACAGCTCGGTGTATTGTGATTGGTGGAGAGCCATTGGGTACACGCTACAAATGGTG
GAATTTTGTCTCTAGCCGACCAGAGCGAATAGAGAAAGCTAAAGCCGATTGGCGAGACTGTCGCTTTGCTACTGTGCCAG
ATGAAACAGAGTTGATTCCACTCCCTGAAGTGGCGACAGAGGCTAATCCTTTGTAA

Upstream 100 bases:

>100_bases
ACTCCCAATCTTTAATTCCATCTTCTCTATTGCTCCCTGCAAACTGTTATGTAGCTCATCGCAACAAATAGATAATTCAT
AAAGGTGAGCTTTTTGTCAG

Downstream 100 bases:

>100_bases
TTAGGCCGCTCTCCGGTATTGGTACAAAATCACTTGATTGCAACCATCTGATTTATTGAAAAGTAGCCTAGATATCTTGC
AAATACACCCATTTACAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDLLIMIPASTNYPPLLMAILQLIEPEVKDLGGFVARRSLPYPHRQMVGPFIFFDHLGPSVLPPNKGIDVRPHPHINIAT
LTYLFDGSIMHRDSLGIVQEIQPGAVNWMTAGKGIVHSERSPDFDRHNEANIHGIQTWIALPVEYEETEPWFTHYPDENL
PTWDENNVTIKLIAGEAHGYTSPVKVFSPILYLDGLLSANGHFTIPTGYSERAVYSVTEGLSINDQPLEPYRLAILESGH
EVKVSATDTARCIVIGGEPLGTRYKWWNFVSSRPERIEKAKADWRDCRFATVPDETELIPLPEVATEANPL

Sequences:

>Translated_311_residues
MDLLIMIPASTNYPPLLMAILQLIEPEVKDLGGFVARRSLPYPHRQMVGPFIFFDHLGPSVLPPNKGIDVRPHPHINIAT
LTYLFDGSIMHRDSLGIVQEIQPGAVNWMTAGKGIVHSERSPDFDRHNEANIHGIQTWIALPVEYEETEPWFTHYPDENL
PTWDENNVTIKLIAGEAHGYTSPVKVFSPILYLDGLLSANGHFTIPTGYSERAVYSVTEGLSINDQPLEPYRLAILESGH
EVKVSATDTARCIVIGGEPLGTRYKWWNFVSSRPERIEKAKADWRDCRFATVPDETELIPLPEVATEANPL
>Mature_311_residues
MDLLIMIPASTNYPPLLMAILQLIEPEVKDLGGFVARRSLPYPHRQMVGPFIFFDHLGPSVLPPNKGIDVRPHPHINIAT
LTYLFDGSIMHRDSLGIVQEIQPGAVNWMTAGKGIVHSERSPDFDRHNEANIHGIQTWIALPVEYEETEPWFTHYPDENL
PTWDENNVTIKLIAGEAHGYTSPVKVFSPILYLDGLLSANGHFTIPTGYSERAVYSVTEGLSINDQPLEPYRLAILESGH
EVKVSATDTARCIVIGGEPLGTRYKWWNFVSSRPERIEKAKADWRDCRFATVPDETELIPLPEVATEANPL

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=281, Percent_Identity=30.9608540925267, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4505823, Length=281, Percent_Identity=30.9608540925267, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 34881; Mature: 34881

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLIMIPASTNYPPLLMAILQLIEPEVKDLGGFVARRSLPYPHRQMVGPFIFFDHLGPS
CCEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCCC
VLPPNKGIDVRPHPHINIATLTYLFDGSIMHRDSLGIVQEIQPGAVNWMTAGKGIVHSER
CCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCHHHHCCCCCEEEEECCCCEEECCC
SPDFDRHNEANIHGIQTWIALPVEYEETEPWFTHYPDENLPTWDENNVTIKLIAGEAHGY
CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCC
TSPVKVFSPILYLDGLLSANGHFTIPTGYSERAVYSVTEGLSINDQPLEPYRLAILESGH
CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
EVKVSATDTARCIVIGGEPLGTRYKWWNFVSSRPERIEKAKADWRDCRFATVPDETELIP
EEEEEECCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHCEEEECCCCCCEEE
LPEVATEANPL
CCHHCCCCCCC
>Mature Secondary Structure
MDLLIMIPASTNYPPLLMAILQLIEPEVKDLGGFVARRSLPYPHRQMVGPFIFFDHLGPS
CCEEEEEECCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCCC
VLPPNKGIDVRPHPHINIATLTYLFDGSIMHRDSLGIVQEIQPGAVNWMTAGKGIVHSER
CCCCCCCCCCCCCCCEEEEEEEEEECCCEEECCCCCHHHHCCCCCEEEEECCCCEEECCC
SPDFDRHNEANIHGIQTWIALPVEYEETEPWFTHYPDENLPTWDENNVTIKLIAGEAHGY
CCCCCCCCCCCEEEEEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCC
TSPVKVFSPILYLDGLLSANGHFTIPTGYSERAVYSVTEGLSINDQPLEPYRLAILESGH
CCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
EVKVSATDTARCIVIGGEPLGTRYKWWNFVSSRPERIEKAKADWRDCRFATVPDETELIP
EEEEEECCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHCCHHHCEEEECCCCCCEEE
LPEVATEANPL
CCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]