Definition | Ureaplasma parvum serovar 3 str. ATCC 27815 chromosome, complete genome. |
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Accession | NC_010503 |
Length | 751,679 |
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The map label for this gene is 170761981
Identifier: 170761981
GI number: 170761981
Start: 37747
End: 38487
Strand: Reverse
Name: 170761981
Synonym: UPA3_0035
Alternate gene names: NA
Gene position: 38487-37747 (Counterclockwise)
Preceding gene: 170762438
Following gene: 170761854
Centisome position: 5.12
GC content: 23.08
Gene sequence:
>741_bases ATGTTGAGTAACAAAAAATTTTTAGATTTAGATATTATAAAGGAATCTTTTGATAATTATTTGAGTGTTGGAACGTCTAG AAGTACTAAAAAATTAAAAACATTACATGGGAGTATAGCAAAAGATTTAGAAGAATTGTTAGGCAAAGAATACAATATTA AATCCCAAGGTTATAGAGATGATAAAGAAGAATGTATTGATGGTAGATATTACAACAAAAAAGTTGATATAACAATTAAA AATAATGGAAAATCAATTGCTGGACTAGCAATTAAATTTGTTATGAGTAATTATTCTCAAAATAGTAATAATTATTTTGA GAATATGTTAGGCGAAACAGCTAATTTACGATCTAATTCAGTTCCTTATTTTCAAATTTTTATAATTTTTGATAAAGTTC CATACTATAAAAGTGATGGTGTATTACAAAAATATGATAATATTTCAAACCACAATTTGGAAAAATATTTAAAATTATCA GATGATGACCCTAAAGTTTATTTTCATACACCAGATAAAACGCTCTTCATTTTACTTAGTTTGAAAGAAATTAGTGAGGA AATTAAAAATAAAAAAGATTACATAAGATGTTATAAAGAAATTATGAATGATGAAGACTTACTAAGTTATTCAAACAAAA TCGATGATTTATTTGGTAATTCTATAATATTAAATAATTATGAAGATTTTATCAAAAGAATGTGCGCTCTTATTATAGGC TATCAAAAAATAAAAACATAA
Upstream 100 bases:
>100_bases TTATTAGGAAAATATAAAAATGGTGGTTATTATACTTTTTCATCGAAAGATGTAAAAAAATACTTGGATTACAAATTAAA AAATGAGGAAATTTAATAAA
Downstream 100 bases:
>100_bases TCAATATAAATTCATACTTTTTTAAAACCTTAATGCAAAATTATATAAGTATTATAAAATAACATATTATTTTAAATTTT AATGGAGGTTAAAGTAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKKVDITIK NNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLS DDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG YQKIKT
Sequences:
>Translated_246_residues MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKKVDITIK NNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLS DDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG YQKIKT >Mature_246_residues MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRDDKEECIDGRYYNKKVDITIK NNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNSVPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLS DDDPKVYFHTPDKTLFILLSLKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG YQKIKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y035_UREPA (Q9PRB0)
Other databases:
- EMBL: AF222894 - RefSeq: NP_077865.1 - GeneID: 876395 - GenomeReviews: AF222894_GR - KEGG: uur:UU035 - HOGENOM: HBG568733 - OMA: KEIMNDE - ProtClustDB: CLSK395236 - BioCyc: UURE95667:UU035-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28727; Mature: 28727
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRD CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DKEECIDGRYYNKKVDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNS CHHHHHCCCEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC VPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLSDDDPKVYFHTPDKTLFILLS CCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHEEECCCCCEEEEECCCCEEEEEEE LKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH YQKIKT HHHHCC >Mature Secondary Structure MLSNKKFLDLDIIKESFDNYLSVGTSRSTKKLKTLHGSIAKDLEELLGKEYNIKSQGYRD CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DKEECIDGRYYNKKVDITIKNNGKSIAGLAIKFVMSNYSQNSNNYFENMLGETANLRSNS CHHHHHCCCEECCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCC VPYFQIFIIFDKVPYYKSDGVLQKYDNISNHNLEKYLKLSDDDPKVYFHTPDKTLFILLS CCEEEEEEEEECCCCCCCCCHHHHHCCCCCCCHHHHEEECCCCCEEEEECCCCEEEEEEE LKEISEEIKNKKDYIRCYKEIMNDEDLLSYSNKIDDLFGNSIILNNYEDFIKRMCALIIG HHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH YQKIKT HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724